RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 A6NDX4 124 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 RRP9O43818 475 aaKnown RBP7.22□□□□□ -1.25
DDX39B-216ENST00000462421 IGHV3-7P01780 117 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 PF4V1P10720 104 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 CPEP16870 476 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 BLVRBP30043 206 aaPredicted RBP7.22□□□□□ -1.25
DDX39B-216ENST00000462421 TALDO1P37837 337 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 PROK1P58294 105 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 RPS11P62280 158 aaKnown RBP eCLIP7.22□□□□□ -1.25
DDX39B-216ENST00000462421 RELBQ01201 579 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 CBX3Q13185 183 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 ARL6IP1Q15041 203 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 C17orf58Q2M2W7 97 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 NSUN5P1Q3KNT7 163 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 ABCA11PQ4W5N1 156 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 OR2W3Q7Z3T1 314 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 ZNF554Q86TJ5 538 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 TGIF2LXQ8IUE1 241 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 Q8NFD4 153 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 OR2AK2Q8NG84 335 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 OR4K15Q8NH41 348 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 OR56B4Q8NH76 319 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 PLPPR1Q8TBJ4 325 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 TAF15Q92804 592 aaKnown RBP eCLIP7.22□□□□□ -1.25
DDX39B-216ENST00000462421 Q96M66 194 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 CITED1Q99966 193 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 YTHDF1Q9BYJ9 559 aaKnown RBP7.22□□□□□ -1.25
DDX39B-216ENST00000462421 DUSP21Q9H596 190 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 GFOD1Q9NXC2 390 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 JPT1Q9UK76 154 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 PSG11Q9UQ72 335 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 V9GY05 133 aa7.22□□□□□ -1.25
DDX39B-216ENST00000462421 A0A1W2PP11 408 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 MAGEA13PA6NCF6 341 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 IGLV1-47P01700 117 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 PF4P02776 101 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 MT-ND4P03905 459 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 CD3GP09693 182 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 UCHL1P09936 223 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 PAX6P26367 422 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 RPS25P62851 125 aaKnown RBP7.21□□□□□ -1.26
DDX39B-216ENST00000462421 RPS27AP62979 156 aaKnown RBP7.21□□□□□ -1.26
DDX39B-216ENST00000462421 TPBGQ13641 420 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 P2RY14Q15391 338 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 STEAP3Q658P3 488 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 RNF144BQ7Z419 303 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 THNSL2Q86YJ6 484 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 ZNF485Q8NCK3 441 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 OR51D1Q8NGF3 324 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 OR10V1Q8NGI7 309 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 OR2T10Q8NGZ9 312 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 FAM110DQ8TAY7 271 aaPredicted RBP7.21□□□□□ -1.26
DDX39B-216ENST00000462421 EDARADDQ8WWZ3 215 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 LEAP2Q969E1 77 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 RBM14Q96PK6 669 aaKnown RBP7.21□□□□□ -1.26
DDX39B-216ENST00000462421 S1PR3Q99500 378 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 RASL11BQ9BPW5 248 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 OCSTAMPQ9BR26 566 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 TAF9BQ9HBM6 251 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 RCC2Q9P258 522 aaKnown RBP7.21□□□□□ -1.26
DDX39B-216ENST00000462421 KIAA1456Q9P272 454 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 SSR3Q9UNL2 185 aa7.21□□□□□ -1.26
DDX39B-216ENST00000462421 IGHV3-43A0A0B4J1X8 118 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 TRAV39A0A0B4J263 110 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 SERPINE3A8MV23 424 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 NPIPB11E5RHQ5 1161 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 SLC17A2O00624 439 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 LCE2BO14633 110 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 KCNAB3O43448 404 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 MMP23AO75900 390 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 SCGNO76038 276 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 IGKV1D-33P01593 117 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 IGKV1-33P01594 117 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 HBZP02008 142 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 SNRNP70P08621 437 aaKnown RBP7.2□□□□□ -1.26
DDX39B-216ENST00000462421 IGHV3-43DP0DP04 118 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 VSIG8P0DPA2 414 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 RAB3BP20337 219 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 MAP2K4P45985 399 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 EFNB2P52799 333 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 HNF4GQ14541 408 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 PLGLAQ15195 96 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 TIMM50Q3ZCQ8 353 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 NDUFA11Q86Y39 141 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 LYG1Q8N1E2 194 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 DRAM1Q8N682 238 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 C11orf44Q8N8P7 122 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 C8orf31Q8N9H6 132 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 OR5AU1Q8NGC0 362 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 OR8H1Q8NGG4 311 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 CMSS1Q9BQ75 279 aaKnown RBP7.2□□□□□ -1.26
DDX39B-216ENST00000462421 ABHD14AQ9BUJ0 271 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 C12orf4Q9NQ89 552 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 RAB22AQ9UL26 194 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 LSM2Q9Y333 95 aaKnown RBP7.2□□□□□ -1.26
DDX39B-216ENST00000462421 SIGLEC9Q9Y336 463 aa7.2□□□□□ -1.26
DDX39B-216ENST00000462421 AK6Q9Y3D8 172 aaKnown RBP7.2□□□□□ -1.26
DDX39B-216ENST00000462421 RBM7Q9Y580 266 aaKnown RBP7.2□□□□□ -1.26
DDX39B-216ENST00000462421 A0A1W2PPE3 182 aa7.19□□□□□ -1.26
DDX39B-216ENST00000462421 TCRBV4S1A1TA0A5B7 111 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms