RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 DNAJB11Q9UBS4 358 aa9.25□□□□□ -0.93
APTX-209ENST00000460940 SETD2Q9BYW2 2564 aaPredicted RBP9.24□□□□□ -0.93
APTX-209ENST00000460940 TRBV23-1A0A0A0MS06 115 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 TMEM127O75204 238 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 RHBDL1O75783 438 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 WNT2P09544 360 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 GLRA1P23415 457 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 SOX2P48431 317 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 NPY4RP50391 375 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 MTCP1P56278 107 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 RPS11P62280 158 aaKnown RBP eCLIP9.24□□□□□ -0.93
APTX-209ENST00000460940 PDZK1IP1Q13113 114 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 PEA15Q15121 130 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 RNASE12Q5GAN4 147 aaKnown RBP9.24□□□□□ -0.93
APTX-209ENST00000460940 SFRP4Q6FHJ7 346 aaPredicted RBP9.24□□□□□ -0.93
APTX-209ENST00000460940 ZNF529Q6P280 563 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 C15orf54Q8N8G6 183 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 TMEM186Q96B77 213 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 NRIP2Q9BQI9 281 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 SEC11CQ9BY50 192 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 ALX4Q9H161 411 aaPredicted RBP9.24□□□□□ -0.93
APTX-209ENST00000460940 KAAG1Q9UBP8 84 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 CKLFQ9UBR5 152 aa9.24□□□□□ -0.93
APTX-209ENST00000460940 POLR3KQ9Y2Y1 108 aaPredicted RBP9.24□□□□□ -0.93
APTX-209ENST00000460940 YLPM1P49750 1951 aaKnown RBP9.24□□□□□ -0.93
APTX-209ENST00000460940 IGKV1-27A0A075B6S5 117 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 PPIAL4CA0A0B4J2A2 164 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 ANKRD20A5PA0PJZ0 165 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 NKX6-3A6NJ46 265 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 TNFRSF13BO14836 293 aaPredicted RBP9.23□□□□□ -0.93
APTX-209ENST00000460940 CYB5AP00167 134 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 FSTP19883 344 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 GATA3P23771 443 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 OR10A3P58181 314 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 RAB4BP61018 213 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 DEFA6Q01524 100 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 KRBOX4Q5JUW0 171 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 STUMQ69YW2 141 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 OR2W3Q7Z3T1 314 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 CALHM1Q8IU99 346 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 Q8IYB0 196 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 KCNRGQ8N5I3 272 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 TCTEX1D2Q8WW35 142 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 SSBP3Q9BWW4 388 aaPredicted RBP9.23□□□□□ -0.93
APTX-209ENST00000460940 AUNIPQ9H7T9 357 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 GHRLQ9UBU3 117 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 IGHV3OR15-7A0A075B7D8 119 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 TRBV5-7A0A0A0MS05 114 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 COLCA2A8K830 154 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 ZNF879B4DU55 563 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 ADAM20O43506 726 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 BCL2L11O43521 198 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 SYNGR1O43759 233 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 GYPAP02724 150 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 HCKP08631 526 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 TMEM11P17152 192 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 H2BFSP57053 126 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 HOXA4Q00056 320 aaPredicted RBP9.23□□□□□ -0.93
APTX-209ENST00000460940 COTL1Q14019 142 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 ATPAF1Q5TC12 328 aaPredicted RBP9.23□□□□□ -0.93
APTX-209ENST00000460940 SLC36A1Q7Z2H8 476 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 ANGPTL5Q86XS5 388 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 MKXQ8IYA7 352 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 ZFP82Q8N141 532 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 OR2AK2Q8NG84 335 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 OR13C5Q8NGS8 318 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 GINS4Q9BRT9 223 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 WDR13Q9H1Z4 485 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 LPAR2Q9HBW0 351 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 HES4Q9HCC6 221 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 HIF1ANQ9NWT6 349 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 TAS2R4Q9NYW5 299 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 LPAR3Q9UBY5 353 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 CLN8Q9UBY8 286 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 OR5V1Q9UGF6 321 aa9.23□□□□□ -0.93
APTX-209ENST00000460940 FN1P02751 2386 aaKnown RBP9.22□□□□□ -0.93
APTX-209ENST00000460940 NAV3Q8IVL0 2385 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 C9orf170A2RU37 121 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 KIAA1324LA8MWY0 1029 aaPredicted RBP9.22□□□□□ -0.93
APTX-209ENST00000460940 FGF16O43320 207 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 OR2F2O95006 317 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 NXPH2O95156 264 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 ERVK11-1P61568 191 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 GNB2P62879 340 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 BLOC1S1P78537 153 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 OR2F1Q13607 317 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 ASPHD2Q6ICH7 369 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 ACP7Q6ZNF0 438 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 SLC25A26Q70HW3 274 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 Q71RC1 249 aaPredicted RBP9.22□□□□□ -0.93
APTX-209ENST00000460940 SAXO1Q8IYX7 474 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 ZNF561Q8N587 486 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 ZSCAN4Q8NAM6 433 aaPredicted RBP9.22□□□□□ -0.93
APTX-209ENST00000460940 C15orf40Q8WUR7 153 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 WDR89Q96FK6 387 aaPredicted RBP9.22□□□□□ -0.93
APTX-209ENST00000460940 DERL3Q96Q80 235 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 OR14A2Q96R54 314 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 PFDN5Q99471 154 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 TMPRSS5Q9H3S3 457 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 RHOFQ9HBH0 211 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms