RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 RHBDL2Q9NX52 303 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 SDCBPO00560 298 aaPredicted RBP8.71□□□□□ -1.02
UBR4-208ENST00000459947 IDNKQ5T6J7 187 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 OR10K2Q6IF99 312 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 ZDHHC22Q8N966 263 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 CAPSLQ8WWF8 208 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 EDARADDQ8WWZ3 215 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 AKR1E2Q96JD6 320 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 OCSTAMPQ9BR26 566 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 GNG12Q9UBI6 72 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 ADAM30Q9UKF2 790 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 CTXN2P0C2S0 81 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 SOX6P35712 828 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 TMBIM6P55061 237 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 ACTG1P63261 375 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 HLA-DRB3P79483 266 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 FOXL1Q12952 345 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 FAM71F2Q6NXP2 309 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 NKX3-1Q99801 234 aaPredicted RBP8.71□□□□□ -1.02
UBR4-208ENST00000459947 SULT4A1Q9BR01 284 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 VPREB3Q9UKI3 123 aa8.71□□□□□ -1.02
UBR4-208ENST00000459947 NDUFA7O95182 113 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 VENTXO95231 258 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 NFYBP25208 207 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 IER3P46695 156 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 RORCP51449 518 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 MADCAM1Q13477 382 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 C16orf87Q6PH81 154 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 Q6ZS49 121 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 DCSTAMPQ9H295 470 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 ING3Q9NXR8 418 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 ARHGAP32A7KAX9 2087 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 SHISA3A0PJX4 238 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 C15orf65H3BRN8 121 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 J3QR06 171 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 CLDN12P56749 244 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 ARFRP1Q13795 201 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 UBE2NLQ5JXB2 153 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 BCL6BQ8N143 479 aaPredicted RBP8.7□□□□□ -1.02
UBR4-208ENST00000459947 LGALS14Q8TCE9 139 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 RPEQ96AT9 228 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 ZNF48Q96MX3 618 aaPredicted RBP8.7□□□□□ -1.02
UBR4-208ENST00000459947 TAF9BQ9HBM6 251 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 C12orf77C9JDV5 145 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 YPEL1O60688 119 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 IGLV1-47P01700 117 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 HBZP02008 142 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 PLA1AQ53H76 456 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 C6orf201Q7Z4U5 140 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 THNSL2Q86YJ6 484 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 SLC25A46Q96AG3 418 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 S100A16Q96FQ6 103 aaKnown RBP8.7□□□□□ -1.02
UBR4-208ENST00000459947 YPEL2Q96QA6 119 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 NICN1Q9BSH3 213 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 ZNF286AQ9HBT8 521 aa8.7□□□□□ -1.02
UBR4-208ENST00000459947 MFNGO00587 321 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 SLC9A3R2Q15599 337 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 OR4A4PQ8NGN8 299 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 OR10X1Q8NGY0 326 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 OR4F5Q8NH21 305 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 SPATA3Q8NHX4 192 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 TOMM40LQ969M1 308 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 FAAP24Q9BTP7 215 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 ABCG5Q9H222 651 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 AK3Q9UIJ7 227 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 RAB27BO00194 218 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 SOCS1O15524 211 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 HKR1P10072 659 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 GNG2P59768 71 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 MXD1Q05195 221 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 ZNF816Q0VGE8 651 aaPredicted RBP8.69□□□□□ -1.02
UBR4-208ENST00000459947 TPTE2P1Q5T6R2 138 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 OR4K15Q8NH41 348 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 CCDC107Q8WV48 283 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 AJUBAQ96IF1 538 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 ARHGAP5-AS1Q96IT6 56 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 MMP24Q9Y5R2 645 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 TMEM89A2RUT3 159 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 M0QZK8 103 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 HOXA3O43365 443 aaPredicted RBP8.69□□□□□ -1.02
UBR4-208ENST00000459947 GAPDHP04406 335 aaKnown RBP8.69□□□□□ -1.02
UBR4-208ENST00000459947 ZNF182P17025 639 aaPredicted RBP8.69□□□□□ -1.02
UBR4-208ENST00000459947 GPR107Q5VW38 600 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 DHRS7BQ6IAN0 325 aaPredicted RBP8.69□□□□□ -1.02
UBR4-208ENST00000459947 BAIAP2L2Q6UXY1 529 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 OR4P4Q8NGL7 312 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 SETD6Q8TBK2 473 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 Q9N2K0 584 aa8.69□□□□□ -1.02
UBR4-208ENST00000459947 A0A0A6YYD4 124 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 SMIM31A0A1B0GVY4 71 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 TRDCB7Z8K6 153 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 BUB1B-PAK6H3BSN5 160 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 SLC2A2P11168 524 aaPredicted RBP8.68□□□□□ -1.02
UBR4-208ENST00000459947 SSX3Q99909 188 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 C19orf24Q9BVV8 132 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 NDUFA13Q9P0J0 144 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 APOA1P02647 267 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 TFAP2AP05549 437 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 SNRPBP14678 240 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms