RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-209	ENST00000459904	CDRT1	O95170	752 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	SOX2	P48431	317 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	ASPHD1	Q5U4P2	390 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	PRSS48	Q7RTY5	328 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	SBSPON	Q8IVN8	264 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904		Q8N6K4	173 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	SUMF2	Q8NBJ7	301 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	HAVCR2	Q8TDQ0	301 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	TNFAIP8L1	Q8WVP5	186 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	LYST	Q99698	3801 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	ABCG5	Q9H222	651 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	KLK15	Q9H2R5	256 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	GNB4	Q9HAV0	340 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	ERVK13-1	Q9NX77	482 aa		11.77	□□□□□ -0.53
LMNA-209	ENST00000459904	CSMD3	Q7Z407	3707 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904		A0A1W2PP11	408 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	MAGEA13P	A6NCF6	341 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	AP4M1	O00189	453 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	RAMP3	O60896	148 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	GAPDH	P04406	335 aa	Known RBP	11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	SLC2A2	P11168	524 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	MTNR1B	P49286	362 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	EBI3	Q14213	229 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	GALE	Q14376	348 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	KIR2DS1	Q14954	304 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	SPART	Q8N0X7	666 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	COMMD1	Q8N668	190 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	NANOGP1	Q8N7R0	232 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	TSPAN14	Q8NG11	270 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	GPER1	Q99527	375 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	LINC00574	Q9H8X3	128 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	TAS2R4	Q9NYW5	299 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	ING4	Q9UNL4	249 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	WSB1	Q9Y6I7	421 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	STARD9	Q9P2P6	4700 aa		11.76	□□□□□ -0.53
LMNA-209	ENST00000459904	TRIM64C	A6NLI5	447 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	C3orf84	H3BNL1	204 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	C15orf65	H3BRN8	121 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	ZFPL1	O95159	310 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	MAP2K4	P45985	399 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	CDX1	P47902	265 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	CCR9	P51686	369 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	GTF2A1	P52655	376 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	CFHR3	Q02985	330 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	FOXE3	Q13461	319 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	CASC10	Q5T4H9	136 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	ZNF773	Q6PK81	442 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	TGIF2LX	Q8IUE1	241 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	ZNF485	Q8NCK3	441 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	TMEM104	Q8NE00	496 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	OR11H1	Q8NG94	326 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	OR10V1	Q8NGI7	309 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	OR2T10	Q8NGZ9	312 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	OR8U1	Q8NH10	309 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	TSEN15	Q8WW01	171 aa	Known RBP	11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	RGP1	Q92546	391 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	ARL11	Q969Q4	196 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	S1PR3	Q99500	378 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	ALG8	Q9BVK2	526 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	DPCD	Q9BVM2	203 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	BARHL1	Q9BZE3	327 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	CCDC90B	Q9GZT6	254 aa		11.75	□□□□□ -0.53
LMNA-209	ENST00000459904	ALX4	Q9H161	411 aa	Predicted RBP	11.75	□□□□□ -0.53
LMNA-209	ENST00000459904		A0A087WXM4	84 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904		G3V318	75 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	SDCBP	O00560	298 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	CNTFR	P26992	372 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	GNB1	P62873	340 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	DCTN2	Q13561	401 aa	Known RBP	11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	DOC2B	Q14184	412 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	RSU1	Q15404	277 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	OR2G6	Q5TZ20	316 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	ZFAND6	Q6FIF0	208 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	ELP2	Q6IA86	826 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	SERPINA12	Q8IW75	414 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	MUC7	Q8TAX7	377 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	CASTOR1	Q8WTX7	329 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	RITA1	Q96K30	269 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	KCTD7	Q96MP8	289 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	LIN7C	Q9NUP9	197 aa	Known RBP	11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	CHCHD3	Q9NX63	227 aa	Known RBP	11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	TNC	P24821	2201 aa		11.74	□□□□□ -0.53
LMNA-209	ENST00000459904	GEMIN2	O14893	280 aa	Known RBP	11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	OR7C1	O76099	320 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	SMIM18	P0DKX4	95 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	MYL12A	P19105	171 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	SLC6A1	P30531	599 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	ZNF134	P52741	427 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	KIAA0141	Q14154	515 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	IL13RA2	Q14627	380 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	ATAD3C	Q5T2N8	411 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	XAF1	Q6GPH4	301 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	KCTD20	Q7Z5Y7	419 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	IZUMO1	Q8IYV9	350 aa		11.73	□□□□□ -0.53
LMNA-209	ENST00000459904	PARP16	Q8N5Y8	322 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms