RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 GNG10P50151 68 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 ARHGDIBP52566 201 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 TIMM50Q3ZCQ8 353 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 C6orf183Q5T699 404 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 TPTE2P1Q5T6R2 138 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 CCBE1Q6UXH8 406 aaPredicted RBP16.7■□□□□ 0.26
VARS-218ENST00000459667 GAPTQ8N292 157 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 OR4C13Q8NGP0 309 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 KCTD7Q96MP8 289 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 TM2D1Q9BX74 207 aa16.7■□□□□ 0.26
VARS-218ENST00000459667 AMMECR1Q9Y4X0 333 aaPredicted RBP16.7■□□□□ 0.26
VARS-218ENST00000459667 HES5Q5TA89 166 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 SLC16A12Q6ZSM3 486 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 TPRA1Q86W33 373 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 TMEM219Q86XT9 240 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 FAM3DQ96BQ1 224 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 CHCHD6Q9BRQ6 235 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 NPFFR1Q9GZQ6 430 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 OR51E2Q9H255 320 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 RANBP3Q9H6Z4 567 aaPredicted RBP16.69■□□□□ 0.26
VARS-218ENST00000459667 RAB9BQ9NP90 201 aa16.69■□□□□ 0.26
VARS-218ENST00000459667 SHISA3A0PJX4 238 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 IFITM5A6NNB3 132 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 C12orf77C9JDV5 145 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 LY6LH3BQJ8 138 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 SDCBPO00560 298 aaPredicted RBP16.68■□□□□ 0.26
VARS-218ENST00000459667 SPINT2O43291 252 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 BRS3P32247 399 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 CLDN12P56749 244 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 PROK1P58294 105 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 TRAT1Q6PIZ9 186 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 C6orf201Q7Z4U5 140 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 OR51D1Q8NGF3 324 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 OR52M1Q8NGK5 317 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 SGMS2Q8NHU3 365 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 SULT4A1Q9BR01 284 aa16.68■□□□□ 0.26
VARS-218ENST00000459667 IGHV3-43A0A0B4J1X8 118 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 LOC100506127A0A0U1RQW1 187 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 OOSP1A8MZH6 123 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 IGHV3-43DP0DP04 118 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 RCC1P18754 421 aaPredicted RBP16.67■□□□□ 0.26
VARS-218ENST00000459667 GADD45AP24522 165 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 BLVRBP30043 206 aaPredicted RBP16.67■□□□□ 0.26
VARS-218ENST00000459667 OR10A3P58181 314 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 C2orf76Q3KRA6 126 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 CCDC144NLQ6NUI1 221 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 PRR18Q8N4B5 295 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 MRPL30Q8TCC3 161 aaKnown RBP16.67■□□□□ 0.26
VARS-218ENST00000459667 TOMM40LQ969M1 308 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 RPEQ96AT9 228 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 LPAR5Q9H1C0 372 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 GFOD1Q9NXC2 390 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 FBLN5Q9UBX5 448 aa16.67■□□□□ 0.26
VARS-218ENST00000459667 A0A0A6YYD4 124 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 A0A1W2PPE3 182 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 HBZP02008 142 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 MNDAP41218 407 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 LOXL3P58215 753 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 SRSF4Q08170 494 aaKnown RBP16.66■□□□□ 0.26
VARS-218ENST00000459667 MADCAM1Q13477 382 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 OR10X1Q8NGY0 326 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 FAAP24Q9BTP7 215 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 MBNL3Q9NUK0 354 aaKnown RBP16.66■□□□□ 0.26
VARS-218ENST00000459667 KCNIP1Q9NZI2 227 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 RAB22AQ9UL26 194 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 SIGLEC9Q9Y336 463 aa16.66■□□□□ 0.26
VARS-218ENST00000459667 TRIM64CA6NLI5 447 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 NOTOA8MTQ0 251 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 CD24P25063 80 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 KIR2DS4P43632 304 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 TMEM30BQ3MIR4 351 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 FAM53AQ6NSI3 398 aaPredicted RBP16.65■□□□□ 0.26
VARS-218ENST00000459667 OR1L1Q8NH94 360 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 OR2T6Q8NHC8 308 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 TAF9BQ9HBM6 251 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 PLEKHJ1Q9NW61 149 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 GNG12Q9UBI6 72 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 FBN3Q75N90 2809 aa16.65■□□□□ 0.26
VARS-218ENST00000459667 SOCS1O15524 211 aa16.64■□□□□ 0.25
VARS-218ENST00000459667 KRTAP10-3P60369 221 aa16.64■□□□□ 0.25
VARS-218ENST00000459667 ZNF554Q86TJ5 538 aa16.64■□□□□ 0.25
VARS-218ENST00000459667 FAM89BQ8N5H3 189 aa16.64■□□□□ 0.25
VARS-218ENST00000459667 DTX3Q8N9I9 347 aa16.64■□□□□ 0.25
VARS-218ENST00000459667 OR56B1Q8NGI3 324 aa16.64■□□□□ 0.25
VARS-218ENST00000459667 CITED1Q99966 193 aa16.64■□□□□ 0.25
VARS-218ENST00000459667 LIN7BQ9HAP6 207 aa16.64■□□□□ 0.25
VARS-218ENST00000459667 TMEM272A0A1B0GTI8 110 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 LDLRAD4O15165 306 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 AIREO43918 545 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 SDC2P34741 201 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 EFNB2P52799 333 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 DIAPH2-AS1Q14236 149 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 Q3ZCU0 254 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 LINC00311Q8N616 119 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 C8orf31Q8N9H6 132 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 OR10V1Q8NGI7 309 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 ZNF702PQ9H963 129 aa16.63■□□□□ 0.25
VARS-218ENST00000459667 CHMP1AQ9HD42 196 aaPredicted RBP16.63■□□□□ 0.25
VARS-218ENST00000459667 A0A1W2PPI3 338 aa16.62■□□□□ 0.25
VARS-218ENST00000459667 SMIM30A4D0T7 59 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms