RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 STEAP3Q658P3 488 aa16.88■□□□□ 0.29
CPNE1-220ENST00000458038 ZNF497Q6ZNH5 498 aa16.88■□□□□ 0.29
CPNE1-220ENST00000458038 NEK7Q8TDX7 302 aa16.88■□□□□ 0.29
CPNE1-220ENST00000458038 CHCHD3Q9NX63 227 aaKnown RBP16.88■□□□□ 0.29
CPNE1-220ENST00000458038 SPINT2O43291 252 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 MT-ND4P03905 459 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 GTF2F2P13984 249 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 VDAC1P21796 283 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 BDKRB2P30411 391 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 SOX6P35712 828 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 ATAD3CQ5T2N8 411 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 DDI2Q5TDH0 399 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 C4orf3Q8WVX3 66 aa16.87■□□□□ 0.29
CPNE1-220ENST00000458038 RGP1Q92546 391 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-220ENST00000458038 AIPO00170 330 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 IGF1P05019 195 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 LIMS3P0CW19 117 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 LIMS4P0CW20 117 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 SERPINA2P20848 420 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 GTF2A1P52655 376 aaPredicted RBP16.86■□□□□ 0.29
CPNE1-220ENST00000458038 TMPRSS11AQ6ZMR5 421 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 SLC25A48Q6ZT89 311 aaKnown RBP16.86■□□□□ 0.29
CPNE1-220ENST00000458038 FAM71E2Q8N5Q1 922 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 CCDC107Q8WV48 283 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 MRPS24Q96EL2 167 aaKnown RBP16.86■□□□□ 0.29
CPNE1-220ENST00000458038 C9orf16Q9BUW7 83 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 FGF20Q9NP95 211 aaPredicted RBP16.86■□□□□ 0.29
CPNE1-220ENST00000458038 ZNF581Q9P0T4 197 aa16.86■□□□□ 0.29
CPNE1-220ENST00000458038 LOC100130705A0A1B0GUX0 176 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 SEC14L6B5MCN3 397 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 H3BNX3 289 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 DCKP27707 260 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 INSL3P51460 131 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 LUMP51884 338 aaPredicted RBP16.85■□□□□ 0.29
CPNE1-220ENST00000458038 CFHR3Q02985 330 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 DEFB136Q30KP8 78 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 C6orf183Q5T699 404 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 TRAT1Q6PIZ9 186 aa16.85■□□□□ 0.29
CPNE1-220ENST00000458038 MCRIP1C9JLW8 97 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 GPX5O75715 221 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 PSMB8P28062 276 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 ECI1P42126 302 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 RIPK1Q13546 671 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 FHL3Q13643 280 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 SLC22A6Q4U2R8 563 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 GNG12Q9UBI6 72 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 CKLFQ9UBR5 152 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 SCOCQ9UIL1 159 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 TRAPPC2LQ9UL33 140 aa16.84■□□□□ 0.29
CPNE1-220ENST00000458038 OGG1O15527 345 aa16.83■□□□□ 0.28
CPNE1-220ENST00000458038 CA11O75493 328 aa16.83■□□□□ 0.28
CPNE1-220ENST00000458038 ZNF439Q8NDP4 499 aa16.83■□□□□ 0.28
CPNE1-220ENST00000458038 ZNF184Q99676 751 aaPredicted RBP16.83■□□□□ 0.28
CPNE1-220ENST00000458038 RCC2Q9P258 522 aaKnown RBP16.83■□□□□ 0.28
CPNE1-220ENST00000458038 IGHV3-43A0A0B4J1X8 118 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 IRGMA1A4Y4 181 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 C12orf77C9JDV5 145 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 C3orf84H3BNL1 204 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 LANCL1O43813 399 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 IGHV3-43DP0DP04 118 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 F2RL1P55085 397 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 CT45A1Q5HYN5 189 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 SYT6Q5T7P8 510 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-220ENST00000458038 XAF1Q6GPH4 301 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 TMEM65Q6PI78 240 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 CT45A3Q8NHU0 189 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 UBALD1Q8TB05 177 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 MYOZ3Q8TDC0 251 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 SMIM19Q96E16 107 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 UBE2E2Q96LR5 201 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 KCTD7Q96MP8 289 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 PRR25Q96S07 402 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 HSPB9Q9BQS6 159 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 BABAM2Q9NXR7 383 aa16.82■□□□□ 0.28
CPNE1-220ENST00000458038 FAM90A10PA6NDY2 464 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 FAM90A7PA6NKC0 464 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 FAM90A23PA8MXZ1 464 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 ZNF736B4DX44 427 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-220ENST00000458038 GLAP06280 429 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 OR8U8P0C7N1 319 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 IGFBP3P17936 291 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-220ENST00000458038 CHATP28329 748 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 VHLP40337 213 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 RUNX1Q01196 453 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 NKAPLQ5M9Q1 402 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 ZNF554Q86TJ5 538 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 CDH26Q8IXH8 852 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 GAPTQ8N292 157 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 OR11H1Q8NG94 326 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 ETAA1Q9NY74 926 aa16.81■□□□□ 0.28
CPNE1-220ENST00000458038 ZNF107Q9UII5 783 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-220ENST00000458038 ZNF256Q9Y2P7 627 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-220ENST00000458038 SLC31A2O15432 143 aa16.8■□□□□ 0.28
CPNE1-220ENST00000458038 HBZP02008 142 aa16.8■□□□□ 0.28
CPNE1-220ENST00000458038 ETV1P50549 477 aa16.8■□□□□ 0.28
CPNE1-220ENST00000458038 ZNF134P52741 427 aa16.8■□□□□ 0.28
CPNE1-220ENST00000458038 LSAMPQ13449 338 aa16.8■□□□□ 0.28
CPNE1-220ENST00000458038 ZNF260Q3ZCT1 412 aa16.8■□□□□ 0.28
CPNE1-220ENST00000458038 APH1BQ8WW43 257 aa16.8■□□□□ 0.28
CPNE1-220ENST00000458038 TRBV5-5A0A0J9YX44 114 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms