RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 SLC35E3Q7Z769 313 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 PRR18Q8N4B5 295 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 CHPT1Q8WUD6 406 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 NOL4LQ96MY1 436 aaPredicted RBP12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 SPACA1Q9HBV2 294 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 LINC00527Q9UJ94 153 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 IGHV1-3A0A0C4DH29 117 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 EFCAB10A6NFE3 127 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 MCRIP1C9JLW8 97 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 IGFBP3P17936 291 aaPredicted RBP12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 FSTP19883 344 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 KRTAP10-11P60412 298 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 ZNF816Q0VGE8 651 aaPredicted RBP12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 WFDC9Q8NEX5 89 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 OR52M1Q8NGK5 317 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 DPF1Q92782 380 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 PGLYRP3Q96LB9 341 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 GFOD1Q9NXC2 390 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 ETAA1Q9NY74 926 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 GNG12Q9UBI6 72 aa12.47□□□□□ -0.41
CHCHD3-204ENST00000457942 C15orf65H3BRN8 121 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 SPINT2O43291 252 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 ORC5O43913 435 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 CRTAPO75718 401 aaPredicted RBP12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 HOXD3P31249 432 aaPredicted RBP12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 C6orf183Q5T699 404 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 SYT6Q5T7P8 510 aaPredicted RBP12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 RAB12Q6IQ22 244 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 ZNF497Q6ZNH5 498 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 OR2T10Q8NGZ9 312 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 OR4K15Q8NH41 348 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 FBLIM1Q8WUP2 373 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 SELENOIQ9C0D9 397 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 BANF2Q9H503 90 aa12.46□□□□□ -0.41
CHCHD3-204ENST00000457942 RYR2Q92736 4967 aa12.46□□□□□ -0.42
CHCHD3-204ENST00000457942 EPPK1P58107 5090 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 GPX5O75715 221 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 DUS4LO95620 317 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 MT-ND4P03905 459 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 CELP19835 753 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 RPS11P62280 158 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 RPL23AP62750 156 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 DOC2BQ14184 412 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 FAM53AQ6NSI3 398 aaPredicted RBP12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 IZUMO1Q8IYV9 350 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 LINC00311Q8N616 119 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 KLHL30-AS1Q8NEE0 82 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 MRPS24Q96EL2 167 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 EAF1Q96JC9 268 aaPredicted RBP12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 VCX3BQ9H321 246 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 PSORS1C1Q9UIG5 152 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 PEX16Q9Y5Y5 336 aa12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 DYNC2H1Q8NCM8 4307 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-204ENST00000457942 TRBV5-7A0A0A0MS05 114 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 C12orf77C9JDV5 145 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 MGMTP16455 207 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 MAPK3P27361 379 aaPredicted RBP12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 WNT4P56705 351 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 C8orf86Q6ZUL3 223 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 OR2W3Q7Z3T1 314 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 TGIF2LXQ8IUE1 241 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 STPG2Q8N412 459 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 NKAIN3Q8N8D7 197 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 RTN4IP1Q8WWV3 396 aaPredicted RBP12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 THRSPQ92748 146 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 FAM46BQ96A09 425 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 CNBD2Q96M20 576 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 DERL3Q96Q80 235 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 GPR61Q9BZJ8 451 aa12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 RCC2Q9P258 522 aaKnown RBP12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 RRP15Q9Y3B9 282 aaKnown RBP12.44□□□□□ -0.42
CHCHD3-204ENST00000457942 UBE2QL1A1L167 161 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 PTGES3LE9PB15 166 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 AP4M1O00189 453 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 SLC31A2O15432 143 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 TXNL1O43396 289 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 IGHG2P01859 326 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 HBZP02008 142 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 RAB25P57735 213 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 TMEM30BQ3MIR4 351 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 NKAPLQ5M9Q1 402 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 C6orf141Q5SZD1 244 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 TRAT1Q6PIZ9 186 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 MRPL41Q8IXM3 137 aaKnown RBP12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 COMMD1Q8N668 190 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 LINC00482Q8N8I6 264 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 C8orf31Q8N9H6 132 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 ZNF485Q8NCK3 441 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 OR1L1Q8NH94 360 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 RASL11BQ9BPW5 248 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 ZFP57Q9NU63 452 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 LIN7CQ9NUP9 197 aaKnown RBP12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 KCNIP1Q9NZI2 227 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms