RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 PARLQ9H300 379 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 MKKSQ9NPJ1 570 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 B3GALT1Q9Y5Z6 326 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 R4GMQ9 66 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 LOC102723971A0A1B0GUV8 181 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 A0A1B0GW64 132 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 SH2D7A6NKC9 451 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 RRHO14718 337 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 GATA2P23769 480 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 BIKQ13323 160 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 HLA-DRB5Q30154 266 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 DNLZQ5SXM8 178 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 LINC00173Q6ZV60 143 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 C16orf82Q7Z2V1 217 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ABHD12BQ7Z5M8 362 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ZIC4Q8N9L1 334 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 OR10G6Q8NH81 332 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 THAP3Q8WTV1 239 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 METTL21AQ8WXB1 218 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 C18orf12Q96KH6 178 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC7A11Q9UPY5 501 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 NACAE9PAV3 2078 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 TCRBV21S2A2A0A5A6 115 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC17A3O00476 420 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ITGB1BP1O14713 200 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 PLRG1O43660 514 aaKnown RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 GGCTO75223 188 aaKnown RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 PROP1O75360 226 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 IGLV2-14P01704 120 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 IGKV3-11P04433 115 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 METTL15P1P0C7V9 234 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 UTF1Q5T230 341 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 DPPA3Q6W0C5 159 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF705AQ6ZN79 300 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 S100A7AQ86SG5 101 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 LINC01551Q86U37 167 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 LRTM2Q8N967 370 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 FNDC9Q8TBE3 224 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 TMEM170AQ8WVE7 144 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 URB1-AS1Q96HZ7 61 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 C18orf15Q96N68 181 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 PBOV1Q9GZY1 135 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 COMMD4Q9H0A8 199 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 KIR3DX1Q9H7L2 352 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 NOTCH2Q04721 2471 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ACANP16112 2415 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 CCDC85CA6NKD9 419 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF732B4DXR9 585 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 PLPP3O14495 311 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 GDF9O60383 454 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 CDKN1BP46527 198 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 THBS3P49746 956 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 RAB38P57729 211 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 SNAI3Q3KNW1 292 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 SHISA6Q6ZSJ9 500 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC38A9Q8NBW4 561 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 OR5T1Q8NG75 326 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 IFI44Q8TCB0 444 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 EMG1Q92979 244 aaKnown RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF514Q96K75 400 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC7A10Q9NS82 523 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF701Q9NV72 531 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 TECRQ9NZ01 308 aaKnown RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 UPB1Q9UBR1 384 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 SPRY1O43609 319 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 IGLV3-1P01715 115 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 SCTP09683 121 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 TDGF1P13385 188 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 TUBG1P23258 451 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 GABREP78334 506 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 ENDOGQ14249 297 aaKnown RBP3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 TOMM20Q15388 145 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 FIGLAQ6QHK4 219 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 LIAT1Q6ZQX7 453 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 OR10G8Q8NGN5 311 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 OR13C3Q8NGS6 347 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 RNASE11Q8TAA1 199 aaKnown RBP3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 FGFBP3Q8TAT2 258 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 ST6GALNAC6Q969X2 333 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 SLAMF6Q96DU3 332 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 LOXL4Q96JB6 756 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 HSPB9Q9BQS6 159 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 NAA38Q9BRA0 125 aaKnown RBP3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 A8MXE2 369 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 GPR89AB7ZAQ6 455 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 SIRPB1O00241 398 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 TRAF3IP2O43734 574 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 SSSCA1O60232 199 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 CBR3O75828 277 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 TNFSF13O75888 250 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 GPR89BP0CG08 455 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 CD24P25063 80 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC6A8P48029 635 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 RAB7AP51149 207 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF121P58317 390 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 RPL23AP62750 156 aaKnown RBP3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 SAPCD1Q5SSQ6 148 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF818PQ6ZRF7 136 aa3.85□□□□□ -1.79
DEPDC1-202ENST00000456315 CYP2G1PQ6ZSU1 146 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms