RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 GZMHP20718 246 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 DCKP27707 260 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 ZNF137PP52743 207 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 RIPK1Q13546 671 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 SLC25A48Q6ZT89 311 aaKnown RBP12.56□□□□□ -0.4
GPC1-206ENST00000455111 ODF3L1Q8IXM7 274 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 RNF152Q8N8N0 203 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 OR4K15Q8NH41 348 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 GGHQ92820 318 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 MUL1Q969V5 352 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 RITA1Q96K30 269 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 S1PR3Q99500 378 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 B9D2Q9BPU9 175 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 LIN7CQ9NUP9 197 aaKnown RBP12.56□□□□□ -0.4
GPC1-206ENST00000455111 SMPD3Q9NY59 655 aaPredicted RBP12.56□□□□□ -0.4
GPC1-206ENST00000455111 CD2P06729 351 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 VSIG8P0DPA2 414 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 RCC1P18754 421 aaPredicted RBP12.55□□□□□ -0.4
GPC1-206ENST00000455111 FSTP19883 344 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 CD1BP29016 333 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 LUMP51884 338 aaPredicted RBP12.55□□□□□ -0.4
GPC1-206ENST00000455111 GP2P55259 537 aaKnown RBP12.55□□□□□ -0.4
GPC1-206ENST00000455111 KIAA0141Q14154 515 aaPredicted RBP12.55□□□□□ -0.4
GPC1-206ENST00000455111 GNMTQ14749 295 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 NKAPLQ5M9Q1 402 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 SYT6Q5T7P8 510 aaPredicted RBP12.55□□□□□ -0.4
GPC1-206ENST00000455111 LINC00596Q86U02 117 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 ZNF695Q8IW36 515 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 OR10V1Q8NGI7 309 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 CPNE2Q96FN4 548 aaPredicted RBP12.55□□□□□ -0.4
GPC1-206ENST00000455111 RDH12Q96NR8 316 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 OR14A2Q96R54 314 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 BANF2Q9H503 90 aa12.55□□□□□ -0.4
GPC1-206ENST00000455111 AIPO00170 330 aa12.54□□□□□ -0.4
GPC1-206ENST00000455111 SC5DO75845 299 aa12.54□□□□□ -0.4
GPC1-206ENST00000455111 CSTBP04080 98 aaKnown RBP12.54□□□□□ -0.4
GPC1-206ENST00000455111 Q499Y3 187 aa12.54□□□□□ -0.4
GPC1-206ENST00000455111 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
GPC1-206ENST00000455111 GLIPR1L1Q6UWM5 242 aa12.54□□□□□ -0.4
GPC1-206ENST00000455111 OR51D1Q8NGF3 324 aa12.54□□□□□ -0.4
GPC1-206ENST00000455111 OR2T10Q8NGZ9 312 aa12.54□□□□□ -0.4
GPC1-206ENST00000455111 MYOZ3Q8TDC0 251 aa12.54□□□□□ -0.4
GPC1-206ENST00000455111 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
GPC1-206ENST00000455111 LSM4Q9Y4Z0 139 aaKnown RBP12.54□□□□□ -0.4
GPC1-206ENST00000455111 NCBP2LA6PVI3 153 aaKnown RBP12.53□□□□□ -0.4
GPC1-206ENST00000455111 NUDT19A8MXV4 375 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 CCL24O00175 119 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 HBZP02008 142 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 GTF2F2P13984 249 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 SNRPBP14678 240 aaKnown RBP12.53□□□□□ -0.4
GPC1-206ENST00000455111 CNTFRP26992 372 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 PPP3R1P63098 170 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 INSL4Q14641 139 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 PNLIPRP3Q17RR3 467 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 FOXRED2Q8IWF2 684 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 COMMD1Q8N668 190 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 TFAP2CQ92754 450 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 DERL3Q96Q80 235 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
GPC1-206ENST00000455111 MRPS28Q9Y2Q9 187 aaKnown RBP12.53□□□□□ -0.4
GPC1-206ENST00000455111 EXOSC1Q9Y3B2 195 aaKnown RBP12.53□□□□□ -0.4
GPC1-206ENST00000455111 DYNC2H1Q8NCM8 4307 aaKnown RBP12.52□□□□□ -0.4
GPC1-206ENST00000455111 PNMA8CA0A1B0GUJ8 204 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 AP4M1O00189 453 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 MOSP00540 346 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 MAS1P04201 325 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 GNAO1P09471 354 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 CDX1P47902 265 aaPredicted RBP12.52□□□□□ -0.41
GPC1-206ENST00000455111 SLC35B1P78383 322 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 LSAMPQ13449 338 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 GPR50Q13585 617 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 FHL3Q13643 280 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 Q3ZCU0 254 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 YIF1BQ5BJH7 314 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 C6orf141Q5SZD1 244 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 RAB12Q6IQ22 244 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 TEX38Q6PEX7 206 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 OR52L2PQ8NGH6 319 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 MRPL30Q8TCC3 161 aaKnown RBP12.52□□□□□ -0.41
GPC1-206ENST00000455111 TMEM80Q96HE8 168 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 Q96M66 194 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 KLK15Q9H2R5 256 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 MBNL3Q9NUK0 354 aaKnown RBP12.52□□□□□ -0.41
GPC1-206ENST00000455111 ETAA1Q9NY74 926 aa12.52□□□□□ -0.41
GPC1-206ENST00000455111 DNAH7Q8WXX0 4024 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
GPC1-206ENST00000455111 BAG2O95816 211 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 IGHG4P01861 327 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 PSMB8P28062 276 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 PPIFP30405 207 aaKnown RBP12.51□□□□□ -0.41
GPC1-206ENST00000455111 SLC6A1P30531 599 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 FOXE3Q13461 319 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 KIR2DS1Q14954 304 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 LRRC36Q1X8D7 754 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 MORN2Q502X0 79 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 PRR18Q8N4B5 295 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 ZNF555Q8NEP9 628 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms