RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 BAP18Q8IXM2 172 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 TECTBQ96PL2 329 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 TNRC6AQ8NDV7 1962 aaKnown RBP10.32□□□□□ -0.76
COL27A1-202ENST00000451716 CA6P23280 308 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 MRPL49Q13405 166 aaKnown RBP10.32□□□□□ -0.76
COL27A1-202ENST00000451716 HNF4GQ14541 408 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 NSUN5P2Q63ZY6 315 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 UQCC3Q6UW78 93 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 BEND2Q8NDZ0 799 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 FDCSPQ8NFU4 85 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 OR1K1Q8NGR3 316 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 PIGMQ9H3S5 423 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 CACNA1GO43497 2377 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 SCTP09683 121 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 TPT1P13693 172 aaKnown RBP10.32□□□□□ -0.76
COL27A1-202ENST00000451716 ECI1P42126 302 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 FBXW9Q5XUX1 488 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 LHFPL4Q7Z7J7 247 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 SUMF1Q8NBK3 374 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 PHYHIPLQ96FC7 376 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 CLCC1Q96S66 551 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 SMIM3Q9BZL3 60 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 NAA60Q9H7X0 242 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 C22orf46C9J442 243 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 TRAPPC2LH3BP13 241 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 M0QZK8 103 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 HS3ST1O14792 307 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 FTH1P19P0C7X4 201 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 HOXA5P20719 270 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
COL27A1-202ENST00000451716 TNFSF10P50591 281 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 TDGF1P3P51864 188 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 FGF12P61328 243 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 TMEM187Q14656 261 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 RPL7L1Q6DKI1 246 aaKnown RBP10.31□□□□□ -0.76
COL27A1-202ENST00000451716 SLC30A7Q8NEW0 376 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 OR5T1Q8NG75 326 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 CNTNAP3BQ96NU0 1288 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 HIST1H2AAQ96QV6 131 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 CNTNAP3Q9BZ76 1288 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 SMCO4Q9NRQ5 59 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 VSTM5A8MXK1 200 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 LRP3O75074 770 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 SS18L1O75177 396 aaPredicted RBP10.31□□□□□ -0.76
COL27A1-202ENST00000451716 RHBDL1O75783 438 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 LYZL6O75951 148 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 CST4P01036 141 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 IFNA21P01568 189 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 LYL1P12980 280 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 GLP1RP43220 463 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 ERVS71-1P61550 626 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 HERV-K104P61576 105 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 TMEM211Q6ICI0 200 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 P4HA3Q7Z4N8 544 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 RDH5Q92781 318 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 BCL2L2Q92843 193 aaPredicted RBP10.31□□□□□ -0.76
COL27A1-202ENST00000451716 AQP10Q96PS8 301 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 SLC5A7Q9GZV3 580 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 CARHSP1Q9Y2V2 147 aaKnown RBP10.31□□□□□ -0.76
COL27A1-202ENST00000451716 MEMO1Q9Y316 297 aa10.31□□□□□ -0.76
COL27A1-202ENST00000451716 PHOX2AO14813 284 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 PHF1O43189 567 aaPredicted RBP10.3□□□□□ -0.76
COL27A1-202ENST00000451716 PPYP01298 95 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 HKR1P10072 659 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 TMEM178AQ8NBL3 297 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 OR5P3Q8WZ94 311 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 MOB3AQ96BX8 217 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 TP53RKQ96S44 253 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 ZDHHC11Q9H8X9 412 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 CEP250Q9BV73 2442 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 ANKRD30BLA7E2S9 258 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 CDRT15L2A8MXV6 281 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 C20orf204Q6ZNR8 217 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 MKXQ8IYA7 352 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 SECTM1Q8WVN6 248 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 ATMQ13315 3056 aa10.3□□□□□ -0.76
COL27A1-202ENST00000451716 GTF3C1Q12789 2109 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 KIAA2026Q5HYC2 2103 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 ZNF292O60281 2723 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 CNOT4O95628 575 aaKnown RBP10.29□□□□□ -0.76
COL27A1-202ENST00000451716 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
COL27A1-202ENST00000451716 MT-ND4LP03901 98 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 PET100P0DJ07 73 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 IDH3GP51553 393 aaPredicted RBP10.29□□□□□ -0.76
COL27A1-202ENST00000451716 HERPUD1Q15011 391 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 KRTCAP3Q53RY4 240 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 SPIN3Q5JUX0 258 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 PIP4P1Q86T03 277 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 OR5A2Q8NGI9 324 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 OR52M1Q8NGK5 317 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 NUDT11Q96G61 164 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 PLSCR2Q9NRY7 297 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 TRAV39A0A0B4J263 110 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 A6NLC8 198 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 K7EPK0 472 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 M0R143 59 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 SIAH2O43255 324 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 FBXO24O75426 580 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 SELEP16581 610 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms