RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 OR9G1Q8NH87 305 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 SPATA3Q8NHX4 192 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 RFESDQ8TAC1 157 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 ARL11Q969Q4 196 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 FUNDC2Q9BWH2 189 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 PLEKHJ1Q9NW61 149 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 TRAPPC2LQ9UL33 140 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 A0A0B4J203 849 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 SMIM30A4D0T7 59 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 LY6LH3BQJ8 138 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 SPINT2O43291 252 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 TFAP2AP05549 437 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 HKR1P10072 659 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 HTR1DP28221 377 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 Q6ZPA2 131 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 LINC00311Q8N616 119 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 PIFOQ8TCI5 191 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 CCDC107Q8WV48 283 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 CREB3L1Q96BA8 519 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 ARHGAP5-AS1Q96IT6 56 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 DUX5Q96PT3 197 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 PECRQ9BY49 303 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 MMP28Q9H239 520 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL3A1-203ENST00000450867 GFOD1Q9NXC2 390 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 DPM3Q9P2X0 92 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 DAPK2Q9UIK4 370 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 VPREB3Q9UKI3 123 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 PSG11Q9UQ72 335 aa11.61□□□□□ -0.55
COL3A1-203ENST00000450867 METTL21EPA6NDL7 271 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 OOSP1A8MZH6 123 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 BUB1B-PAK6H3BSN5 160 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 J3QR06 171 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 MFNGO00587 321 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 HBZP02008 142 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 NFYBP25208 207 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 PRRX1P54821 245 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 HTD2P86397 168 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 MXD1Q05195 221 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 DYNC1I2Q13409 638 aaKnown RBP11.6□□□□□ -0.55
COL3A1-203ENST00000450867 HMGN3Q15651 99 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 LY6G6FQ5SQ64 297 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 Q6ZTK2 550 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 CROCCP3Q8IVE0 287 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 OR10R2Q8NGX6 335 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 SSX3Q99909 188 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 TAF9BQ9HBM6 251 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 C12orf4Q9NQ89 552 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 AK3Q9UIJ7 227 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 KCNK7Q9Y2U2 307 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 ETV7Q9Y603 341 aa11.6□□□□□ -0.55
COL3A1-203ENST00000450867 FAM172BPA6NC97 362 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 BTBD17A6NE02 478 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 LEUTXA8MZ59 168 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 H3BUX3 64 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 TOR1AO14656 332 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 GPR137BO60478 399 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 SCGNO76038 276 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 GABARAPO95166 117 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 HIST1H1DP16402 221 aaKnown RBP11.59□□□□□ -0.55
COL3A1-203ENST00000450867 TGFBR1P36897 503 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 RPS19P39019 145 aaKnown RBP11.59□□□□□ -0.55
COL3A1-203ENST00000450867 CEACAM3P40198 252 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 MOGAT2Q3SYC2 334 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 ANKRD13BQ86YJ7 626 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 ZNF439Q8NDP4 499 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 LGALS14Q8TCE9 139 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 RAB3CQ96E17 227 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 KCNIP1Q9NZI2 227 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 MGAT4AQ9UM21 535 aa11.59□□□□□ -0.55
COL3A1-203ENST00000450867 AMMECR1Q9Y4X0 333 aaPredicted RBP11.59□□□□□ -0.55
COL3A1-203ENST00000450867 FAM181BA6NEQ2 426 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 SERPINE3A8MV23 424 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 SDCBPO00560 298 aaPredicted RBP11.58□□□□□ -0.56
COL3A1-203ENST00000450867 NDUFA7O95182 113 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 SNRPBP14678 240 aaKnown RBP11.58□□□□□ -0.56
COL3A1-203ENST00000450867 ACTG1P63261 375 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 ARL6IP1Q15041 203 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 SSX2Q16385 188 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 TPTE2P1Q5T6R2 138 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 STEAP3Q658P3 488 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 OR1L1Q8NH94 360 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 NDNFQ8TB73 568 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 RHBDL2Q9NX52 303 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 ABRACLQ9P1F3 81 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 JPT1Q9UK76 154 aa11.58□□□□□ -0.56
COL3A1-203ENST00000450867 PAX6P26367 422 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 ZNF137PP52743 207 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 NCS1P62166 190 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 LSM3P62310 102 aaKnown RBP11.57□□□□□ -0.56
COL3A1-203ENST00000450867 CTF1Q16619 201 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 OLFML2AQ68BL7 652 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 SLC25A48Q6ZT89 311 aaKnown RBP11.57□□□□□ -0.56
COL3A1-203ENST00000450867 UBALD1Q8TB05 177 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 LEAP2Q969E1 77 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 SLC25A46Q96AG3 418 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 SLC25A38Q96DW6 304 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 OCSTAMPQ9BR26 566 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 HDHD3Q9BSH5 251 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms