RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	HIST1H2BA	Q96A08	127 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	GPR146	Q96CH1	333 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	GNPNAT1	Q96EK6	184 aa	Predicted RBP	14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	ABHD14A	Q9BUJ0	271 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	ESRP2	Q9H6T0	727 aa	Known RBP	14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	OR1A1	Q9P1Q5	309 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	GPR179	Q6PRD1	2367 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	WRB	O00258	174 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	SNRNP70	P08621	437 aa	Known RBP	14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	CCL20	P78556	96 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	SHE	Q5VZ18	495 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	ZNF497	Q6ZNH5	498 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	ZNF295-AS1	Q8N0V1	137 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	ZDHHC11	Q9H8X9	412 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	KCNJ16	Q9NPI9	418 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	BTBD17	A6NE02	478 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	NXPH3	O95157	252 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	SERPINE2	P07093	398 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	PSG2	P11465	335 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	TESK1	Q15569	626 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	ZNF766	Q5HY98	468 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	ATP1A1-AS1	Q5TC04	95 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058		Q8IYB0	196 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	SCCPDH	Q8NBX0	429 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058	OR51H1	Q8NH63	302 aa		14.36	□□□□□ -0.11
TOM1-210	ENST00000449058		A0A1B0GV50	99 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058		A0A1W2PR80	420 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	CDRT15L2	A8MXV6	281 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	SLC33A1	O00400	549 aa	Predicted RBP	14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	GPR37	O15354	613 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	SMPD2	O60906	423 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	CELA3B	P08861	270 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	ZNF154	Q13106	437 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	HABP2	Q14520	560 aa	Predicted RBP	14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	RNF212	Q495C1	297 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	TMEM217	Q8N7C4	229 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	C2CD4C	Q8TF44	421 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	IL1F10	Q8WWZ1	152 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	ATP5S	Q99766	215 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058	HIPK2	Q9H2X6	1198 aa		14.35	□□□□□ -0.11
TOM1-210	ENST00000449058		M0R036	132 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	OR2H2	O95918	312 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	MT-ND4L	P03901	98 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	PPP1CB	P62140	327 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	RHEB	Q15382	184 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	VASH2	Q86V25	355 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	ZFP82	Q8N141	532 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	GMPPA	Q96IJ6	420 aa	Predicted RBP	14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	RARRES2	Q99969	163 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	POLDIP2	Q9Y2S7	368 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058		R4GN57	208 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	KNTC1	P50748	2209 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	RBFOX3	A6NFN3	312 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	IGKV1-39	P01597	117 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	IGKV1D-39	P04432	117 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	RPL35	P42766	123 aa	Known RBP	14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	LSM10	Q969L4	123 aa	Known RBP	14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	RAB40C	Q96S21	281 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	OR2J1	Q9GZK6	312 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	KIAA1456	Q9P272	454 aa		14.34	□□□□□ -0.11
TOM1-210	ENST00000449058	TRAV39	A0A0B4J263	110 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	SIRPB1	O00241	398 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	TXNL1	O43396	289 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	PGA5	P0DJD9	388 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	OR13C7	P0DN81	318 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	PTAFR	P25105	342 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	RUNX1	Q01196	453 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058		Q6ZRM9	215 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	OR1J1	Q8NGS3	322 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	C20orf24	Q9BUV8	137 aa		14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	MBNL3	Q9NUK0	354 aa	Known RBP	14.33	□□□□□ -0.11
TOM1-210	ENST00000449058	AKR1D1	P51857	326 aa		14.33	□□□□□ -0.12
TOM1-210	ENST00000449058	RAB5B	P61020	215 aa		14.33	□□□□□ -0.12
TOM1-210	ENST00000449058	ARG2	P78540	354 aa		14.33	□□□□□ -0.12
TOM1-210	ENST00000449058	MRPL49	Q13405	166 aa	Known RBP	14.33	□□□□□ -0.12
TOM1-210	ENST00000449058	ZNF146	Q15072	292 aa		14.33	□□□□□ -0.12
TOM1-210	ENST00000449058	TMEM178A	Q8NBL3	297 aa		14.33	□□□□□ -0.12
TOM1-210	ENST00000449058	COA4	Q9NYJ1	87 aa		14.33	□□□□□ -0.12
TOM1-210	ENST00000449058	ZNF98	A6NK75	572 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	IGHV1-2	P23083	117 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	SULT1A1	P50225	295 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	SOX8	P57073	446 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	TAS2R30	P59541	319 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	RPL23A	P62750	156 aa	Known RBP	14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	DPPA3	Q6W0C5	159 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	STX12	Q86Y82	276 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	CD300LF	Q8TDQ1	290 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	CDH20	Q9HBT6	801 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	WIPI2	Q9Y4P8	454 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	DFFB	O76075	338 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	IFNA4	P05014	189 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	DAO	P14920	347 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	RAC2	P15153	192 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	ERVS71-1	P61550	626 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	IZUMO4	Q1ZYL8	232 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	SOHLH1	Q5JUK2	328 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	TRAPPC2L	Q9UL33	140 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	WSB1	Q9Y6I7	421 aa		14.32	□□□□□ -0.12
TOM1-210	ENST00000449058	NCOR1	O75376	2440 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	C1orf196	B1AJZ1	125 aa		14.31	□□□□□ -0.12

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