RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 FOXRED2Q8IWF2 684 aa8.75□□□□□ -1.01
NPIPB3-202ENST00000448012 PRR18Q8N4B5 295 aa8.75□□□□□ -1.01
NPIPB3-202ENST00000448012 NANOGP1Q8N7R0 232 aa8.75□□□□□ -1.01
NPIPB3-202ENST00000448012 CHPT1Q8WUD6 406 aa8.75□□□□□ -1.01
NPIPB3-202ENST00000448012 NEDD4LQ96PU5 975 aa8.75□□□□□ -1.01
NPIPB3-202ENST00000448012 GON7Q9BXV9 100 aa8.75□□□□□ -1.01
NPIPB3-202ENST00000448012 TPRKBQ9Y3C4 175 aa8.75□□□□□ -1.01
NPIPB3-202ENST00000448012 A0A1W2PP11 408 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 A0A1W2PPE3 182 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 PSMB11A5LHX3 300 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 NCBP2LA6PVI3 153 aaKnown RBP8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 G3V4G9 280 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 FGF16O43320 207 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 IGKV1D-33P01593 117 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 IGKV1-33P01594 117 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 CDK1P06493 297 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 FUT3P21217 361 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 RPS11P62280 158 aaKnown RBP eCLIP8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 CD83Q01151 205 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 ZNF816Q0VGE8 651 aaPredicted RBP8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 MED22Q15528 200 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 ACSM3Q53FZ2 586 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 RBM48Q5RL73 367 aaKnown RBP8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 SYT6Q5T7P8 510 aaPredicted RBP8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 SLC35E3Q7Z769 313 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 C8orf31Q8N9H6 132 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 OR51D1Q8NGF3 324 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 OR2T10Q8NGZ9 312 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 BANF2Q9H503 90 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 GFOD1Q9NXC2 390 aa8.74□□□□□ -1.01
NPIPB3-202ENST00000448012 IGHV3-43A0A0B4J1X8 118 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 IGHV1-3A0A0C4DH29 117 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 A0A1W2PPI3 338 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 SH2D7A6NKC9 451 aaPredicted RBP8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 FAM90A9PA6NNJ1 464 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 NUDT19A8MXV4 375 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 PDCD6O75340 191 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 RGS11O94810 467 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 MPIG6BO95866 241 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 IGHV3-43DP0DP04 118 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 REG1BP48304 166 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 SLC35A2P78381 396 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 SPHARQ15513 63 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 KCTD21Q4G0X4 260 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 HSD17B12Q53GQ0 312 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 NKAPLQ5M9Q1 402 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 C6orf141Q5SZD1 244 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 SAMD5Q5TGI4 173 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 TGIF2LXQ8IUE1 241 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 LINC00311Q8N616 119 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 COMMD1Q8N668 190 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 ZNF485Q8NCK3 441 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 OR8H1Q8NGG4 311 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 OR4K15Q8NH41 348 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 UBALD1Q8TB05 177 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 DPF1Q92782 380 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 UFD1Q92890 307 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 FAM46BQ96A09 425 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 TMED9Q9BVK6 235 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 MRPS26Q9BYN8 205 aaKnown RBP8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 GPR61Q9BZJ8 451 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 OR2S2Q9NQN1 319 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 ABRACLQ9P1F3 81 aa8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 RCC2Q9P258 522 aaKnown RBP8.73□□□□□ -1.01
NPIPB3-202ENST00000448012 UBE2QL1A1L167 161 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 C12orf77C9JDV5 145 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 C15orf65H3BRN8 121 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 DUS4LO95620 317 aaKnown RBP8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 HBZP02008 142 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 SMIM18P0DKX4 95 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 TRAM1Q15629 374 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 BEAN1Q3B7T3 259 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 RNLSQ5VYX0 342 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 STEAP3Q658P3 488 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 CEACAM19Q7Z692 300 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 ZNF554Q86TJ5 538 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 C5orf56Q8N8D9 126 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 OR10V1Q8NGI7 309 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 KCNG3Q8TAE7 436 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 WIPF2Q8TF74 440 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 FBLIM1Q8WUP2 373 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 PHYHIPQ92561 330 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 RASL11BQ9BPW5 248 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 CCDC90BQ9GZT6 254 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 CHMP1AQ9HD42 196 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 NECAP2Q9NVZ3 263 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 ZNF581Q9P0T4 197 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 MEGF8Q7Z7M0 2845 aa8.72□□□□□ -1.01
NPIPB3-202ENST00000448012 IGHV3-72A0A0B4J1Y9 119 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 A6NHS1 94 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 AP4M1O00189 453 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 ARL6IP5O75915 188 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 MOSP00540 346 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 AMY1AP04745 511 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 AMY2AP04746 511 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 HSMCR30P0CW71 290 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 PSMA1P25786 263 aaKnown RBP8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 CD1BP29016 333 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 SLC6A1P30531 599 aa8.71□□□□□ -1.02
NPIPB3-202ENST00000448012 DIAPH2-AS1Q14236 149 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms