RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 THBS3P49746 956 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 ST3GAL4Q11206 333 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 MED21Q13503 144 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 GPR176Q14439 515 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 SYT6Q5T7P8 510 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-205ENST00000447041 AWAT2Q6E213 333 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 FOXRED2Q8IWF2 684 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 STX19Q8N4C7 294 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 C8orf31Q8N9H6 132 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 Q8N9W7 124 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 TMEM104Q8NE00 496 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 OR4K15Q8NH41 348 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 ST6GALNAC6Q969X2 333 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 BANF2Q9H503 90 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 WI2-2373I1.2A0A1W2PRP0 233 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 NUDT19A8MXV4 375 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 ZNF736B4DX44 427 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-205ENST00000447041 SLC35B1P78383 322 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 RAB12Q6IQ22 244 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 LAIR2Q6ISS4 152 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 TGIF2LXQ8IUE1 241 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 PRR18Q8N4B5 295 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 DHRSXQ8N5I4 330 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 ZNF439Q8NDP4 499 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 KLHL30-AS1Q8NEE0 82 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 OR10V1Q8NGI7 309 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 OR2T10Q8NGZ9 312 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 DERL3Q96Q80 235 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 SPACA1Q9HBV2 294 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 ETAA1Q9NY74 926 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 TRAPPC2LQ9UL33 140 aa14.34□□□□□ -0.11
COL9A1-205ENST00000447041 MCRIP1C9JLW8 97 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 GNAO1P09471 354 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 IL3RAP26951 378 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 VHLP40337 213 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 GPR12P47775 334 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 ZNF134P52741 427 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 TAS2R43P59537 309 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 EGFEM1PQ0D2K5 195 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 SLC25A48Q6ZT89 311 aaKnown RBP14.33□□□□□ -0.12
COL9A1-205ENST00000447041 LYPD6Q86Y78 171 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 PACRGLQ8N7B6 248 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 OR1L1Q8NH94 360 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 ABCG5Q9H222 651 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 LIN7CQ9NUP9 197 aaKnown RBP14.33□□□□□ -0.12
COL9A1-205ENST00000447041 GNG12Q9UBI6 72 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 DNAH9Q9NYC9 4486 aa14.33□□□□□ -0.12
COL9A1-205ENST00000447041 SPINT2O43291 252 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 HBZP02008 142 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 MGMTP16455 207 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 RCC1P18754 421 aaPredicted RBP14.32□□□□□ -0.12
COL9A1-205ENST00000447041 CD1BP29016 333 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 Q3ZCU0 254 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 C6orf183Q5T699 404 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 AHSA2Q719I0 299 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 GAPTQ8N292 157 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 MRPS24Q96EL2 167 aaKnown RBP14.32□□□□□ -0.12
COL9A1-205ENST00000447041 DUX3Q96PT4 197 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 SELENOIQ9C0D9 397 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 PLSCR3Q9NRY6 295 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 ZFP57Q9NU63 452 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 CNOT2Q9NZN8 540 aaKnown RBP14.32□□□□□ -0.12
COL9A1-205ENST00000447041 PEX16Q9Y5Y5 336 aa14.32□□□□□ -0.12
COL9A1-205ENST00000447041 EFCAB10A6NFE3 127 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 AP4M1O00189 453 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 MYL12BO14950 172 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 CRTAPO75718 401 aaPredicted RBP14.31□□□□□ -0.12
COL9A1-205ENST00000447041 SC5DO75845 299 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 MOSP00540 346 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 CELP19835 753 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 CAPGP40121 348 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 ZNF137PP52743 207 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 WNT4P56705 351 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 RCN1Q15293 331 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 CT45A1Q5HYN5 189 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 SIGIRRQ6IA17 410 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 LCNL1Q6ZST4 164 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 C5orf24Q7Z6I8 188 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 C8orf59Q8N0T1 100 aaPredicted RBP14.31□□□□□ -0.12
COL9A1-205ENST00000447041 COMMD1Q8N668 190 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 CT45A3Q8NHU0 189 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 Q96M66 194 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 S1PR3Q99500 378 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 P2RX4Q99571 388 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 HSPB9Q9BQS6 159 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 C8orf4Q9NR00 106 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 PSORS1C1Q9UIG5 152 aa14.31□□□□□ -0.12
COL9A1-205ENST00000447041 UBE2QL1A1L167 161 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 RPLP1P05386 114 aaKnown RBP14.3□□□□□ -0.12
COL9A1-205ENST00000447041 SLC6A1P30531 599 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 MYCNOSP40205 109 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 F2RL1P55085 397 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 GNMTQ14749 295 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 DEFB121Q5J5C9 76 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 TEX38Q6PEX7 206 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 ZNF695Q8IW36 515 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 CDH26Q8IXH8 852 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 TFAP2CQ92754 450 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 DPF1Q92782 380 aa14.3□□□□□ -0.12
COL9A1-205ENST00000447041 FAM46BQ96A09 425 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms