RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 ZNF554Q86TJ5 538 aa12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 ZNF695Q8IW36 515 aa12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 NEK7Q8TDX7 302 aa12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 GHSRQ92847 366 aa12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 TMEM80Q96HE8 168 aa12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 NOL4LQ96MY1 436 aaPredicted RBP12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 P2RX4Q99571 388 aa12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 CHCHD6Q9BRQ6 235 aa12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 DNAH3Q8TD57 4116 aa12.88□□□□□ -0.35
CTDSP1-204ENST00000443891 NCBP2LA6PVI3 153 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 NUDT19A8MXV4 375 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 H0YHG0 523 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 MOSP00540 346 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 CD1AP06126 327 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 ELANEP08246 267 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 SMN1Q16637 294 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 LRRC36Q1X8D7 754 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 SLC22A6Q4U2R8 563 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 SLC25A48Q6ZT89 311 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 GAPTQ8N292 157 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 RNF152Q8N8N0 203 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 TMEM104Q8NE00 496 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 CYGBQ8WWM9 190 aa12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 RTN4IP1Q8WWV3 396 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-204ENST00000443891 GPR12P47775 334 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 KRTAP10-11P60412 298 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 FOXE3Q13461 319 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 RCN1Q15293 331 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 PACRGLQ8N7B6 248 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 Q8N9W7 124 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 KLHL30-AS1Q8NEE0 82 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 RASL11BQ9BPW5 248 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 TRAPPC2LQ9UL33 140 aa12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 SIRT4Q9Y6E7 314 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-204ENST00000443891 TRBV5-7A0A0A0MS05 114 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 TRAV39A0A0B4J263 110 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 A0A1W2PPE3 182 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 RAMP3O60896 148 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 SC5DO75845 299 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 OR5H8P0DN80 308 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 CDX1P47902 265 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 RPS11P62280 158 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 CXorf66Q5JRM2 361 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 SYT6Q5T7P8 510 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 C8orf86Q6ZUL3 223 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 NKAIN3Q8N8D7 197 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 ZNF485Q8NCK3 441 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 ZNF439Q8NDP4 499 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 OR8U1Q8NH10 309 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 PGLYRP3Q96LB9 341 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 S1PR3Q99500 378 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 ETAA1Q9NY74 926 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 CNOT2Q9NZN8 540 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 ZNF581Q9P0T4 197 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 GNG12Q9UBI6 72 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 GHRLQ9UBU3 117 aa12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 MRPS28Q9Y2Q9 187 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-204ENST00000443891 WI2-2373I1.2A0A1W2PRP0 233 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 EFCAB10A6NFE3 127 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 LANCL1O43813 399 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 LALBAP00709 142 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 FUT3P21217 361 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 MAPK3P27361 379 aaPredicted RBP12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 GPR50Q13585 617 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 DOC2BQ14184 412 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 KIR2DS1Q14954 304 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 GLIPR1L1Q6UWM5 242 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 DHRSXQ8N5I4 330 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 JAGN1Q8N5M9 183 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 B9D2Q9BPU9 175 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 UQCC2Q9BRT2 126 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 PLSCR3Q9NRY6 295 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 LRRC42Q9Y546 428 aa12.84□□□□□ -0.35
CTDSP1-204ENST00000443891 C12orf77C9JDV5 145 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 CCL24O00175 119 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 IGF1P05019 195 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 CAPGP40121 348 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 REG1BP48304 166 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 DGCR2P98153 550 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 LY6G6FQ5SQ64 297 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 AWAT2Q6E213 333 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 RAB12Q6IQ22 244 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 MUL1Q969V5 352 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 DCLRE1BQ9H816 532 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 MBNL3Q9NUK0 354 aaKnown RBP12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 CLEC2DQ9UHP7 191 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 LINC00527Q9UJ94 153 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
CTDSP1-204ENST00000443891 TRAV8-7A0A075B6U6 113 aa12.82□□□□□ -0.36
CTDSP1-204ENST00000443891 IGHV3-72A0A0B4J1Y9 119 aa12.82□□□□□ -0.36
CTDSP1-204ENST00000443891 A0A1W2PP11 408 aa12.82□□□□□ -0.36
CTDSP1-204ENST00000443891 IGHG4P01861 327 aa12.82□□□□□ -0.36
CTDSP1-204ENST00000443891 HBZP02008 142 aa12.82□□□□□ -0.36
CTDSP1-204ENST00000443891 VDAC1P21796 283 aa12.82□□□□□ -0.36
CTDSP1-204ENST00000443891 SOX6P35712 828 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms