RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MRPL30Q8TCC3 161 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-210ENST00000442216 MMP28Q9H239 520 aa12.17□□□□□ -0.46
CSNK1E-210ENST00000442216 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
CSNK1E-210ENST00000442216 DPM3Q9P2X0 92 aa12.17□□□□□ -0.46
CSNK1E-210ENST00000442216 AMMECR1Q9Y4X0 333 aaPredicted RBP12.17□□□□□ -0.46
CSNK1E-210ENST00000442216 METTL21EPA6NDL7 271 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 BUB1B-PAK6H3BSN5 160 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 J3QR06 171 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 NAPSAO96009 420 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 CRYBA1P05813 215 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 SMIM18P0DKX4 95 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 LOXL3P58215 753 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 SSX2Q16385 188 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 LIAT1Q6ZQX7 453 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 MOB1BQ7L9L4 216 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 C8orf31Q8N9H6 132 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 OR13F1Q8NGS4 319 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 GFOD1Q9NXC2 390 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 MGAT4AQ9UM21 535 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 PSG11Q9UQ72 335 aa12.16□□□□□ -0.46
CSNK1E-210ENST00000442216 FAM172BPA6NC97 362 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 H3BUX3 64 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 GPR137BO60478 399 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 SLC2A2P11168 524 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 ARHGDIBP52566 201 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 ARL6IP1Q15041 203 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 ZNF880Q6PDB4 577 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 DYNAPQ8N1N2 210 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 LINC00311Q8N616 119 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 PECRQ9BY49 303 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 MRPS26Q9BYN8 205 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 TAF9BQ9HBM6 251 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 RAB18Q9NP72 206 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 ABCB10Q9NRK6 738 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 TNFRSF19Q9NS68 423 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 DAPK2Q9UIK4 370 aa12.15□□□□□ -0.46
CSNK1E-210ENST00000442216 A0A1B0GUS0 222 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 SMIM30A4D0T7 59 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 LY6LH3BQJ8 138 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 RAB27BO00194 218 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 SCGNO76038 276 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 NDUFA7O95182 113 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 HBZP02008 142 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 EFNB2P52799 333 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 HTD2P86397 168 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 MXD1Q05195 221 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 PLA2G7Q13093 441 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 HMGN3Q15651 99 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 LTC4SQ16873 150 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 PLAC9Q5JTB6 97 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 STEAP3Q658P3 488 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 CCDC144NLQ6NUI1 221 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 OR10R2Q8NGX6 335 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 PIFOQ8TCI5 191 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 RAB3CQ96E17 227 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 FUNDC2Q9BWH2 189 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 AK3Q9UIJ7 227 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 PITPNC1Q9UKF7 332 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 HILPDAQ9Y5L2 63 aa12.14□□□□□ -0.47
CSNK1E-210ENST00000442216 A0A0B4J203 849 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 CLEC2LP0C7M8 214 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 BRS3P32247 399 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 LY6G6FQ5SQ64 297 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 UTF1Q5T230 341 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 TPTE2P1Q5T6R2 138 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 C12orf54Q6X4T0 127 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 OR1L1Q8NH94 360 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 GALMQ96C23 342 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 CYYR1Q96J86 154 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 CMSS1Q9BQ75 279 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 CHMP1AQ9HD42 196 aaPredicted RBP12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 C12orf4Q9NQ89 552 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 ABRACLQ9P1F3 81 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 JPT1Q9UK76 154 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 MMP24Q9Y5R2 645 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 ETV7Q9Y603 341 aa12.13□□□□□ -0.47
CSNK1E-210ENST00000442216 SERPINE3A8MV23 424 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 PAX6P26367 422 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 MADCAM1Q13477 382 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 MOGAT2Q3SYC2 334 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 AWAT1Q58HT5 328 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 DHRS7BQ6IAN0 325 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 OR4F5Q8NH21 305 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 LEAP2Q969E1 77 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 RPEQ96AT9 228 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 ATG5Q9H1Y0 275 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 OR2S2Q9NQN1 319 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 GNG12Q9UBI6 72 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 TCF19Q9Y242 345 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms