RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 OR13A1Q8NGR1 328 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 RFESDQ8TAC1 157 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 SLC29A1Q99808 456 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 LIN7CQ9NUP9 197 aaKnown RBP6.18□□□□□ -1.42
CD44-211ENST00000442151 CNOT2Q9NZN8 540 aaKnown RBP6.18□□□□□ -1.42
CD44-211ENST00000442151 DSCAML1Q8TD84 2053 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 FAM172BPA6NC97 362 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 ADARB2-AS1A8MUL3 147 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 E9PI62 339 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 HSD17B6O14756 317 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 MYL12BO14950 172 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 RAMP3O60896 148 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 MOSP00540 346 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 IGHG2P01859 326 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 MT-ND4P03905 459 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 LIMS3P0CW19 117 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 LIMS4P0CW20 117 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 CD24P25063 80 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 CAPGP40121 348 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 GNG10P50151 68 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 PIGYQ3MUY2 71 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 DEFB121Q5J5C9 76 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 FOXB2Q5VYV0 432 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 Q6ZS46 218 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 IZUMO1Q8IYV9 350 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 MS4A15Q8N5U1 240 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 C5orf56Q8N8D9 126 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 OR56B4Q8NH76 319 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 CYGBQ8WWM9 190 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 GHSRQ92847 366 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 ZNF184Q99676 751 aaPredicted RBP6.18□□□□□ -1.42
CD44-211ENST00000442151 UQCC2Q9BRT2 126 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 ZNF649Q9BS31 505 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 CST11Q9H112 138 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.18□□□□□ -1.42
CD44-211ENST00000442151 AURKAIP1Q9NWT8 199 aaPredicted RBP6.18□□□□□ -1.42
CD44-211ENST00000442151 GFOD1Q9NXC2 390 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 ETAA1Q9NY74 926 aa6.18□□□□□ -1.42
CD44-211ENST00000442151 MRPS28Q9Y2Q9 187 aaKnown RBP6.18□□□□□ -1.42
CD44-211ENST00000442151 PLXNB1O43157 2135 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 IGHV1-3A0A0C4DH29 117 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 TRBV5-5A0A0J9YX44 114 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 GEMIN2O14893 280 aaKnown RBP6.17□□□□□ -1.42
CD44-211ENST00000442151 CDRT1O95170 752 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 IGKV1D-33P01593 117 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 IGKV1-33P01594 117 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 ELANEP08246 267 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 IGLL1P15814 213 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 IGFBP3P17936 291 aaPredicted RBP6.17□□□□□ -1.42
CD44-211ENST00000442151 FSTP19883 344 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 FUT3P21217 361 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 VDAC1P21796 283 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 GDNFP39905 211 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 ETV1P50549 477 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 GTF2A1P52655 376 aaPredicted RBP6.17□□□□□ -1.42
CD44-211ENST00000442151 RPL23AP62750 156 aaKnown RBP6.17□□□□□ -1.42
CD44-211ENST00000442151 SLC22A6Q4U2R8 563 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 GLT8D1Q68CQ7 371 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 DMKNQ6E0U4 476 aaPredicted RBP6.17□□□□□ -1.42
CD44-211ENST00000442151 ZNF497Q6ZNH5 498 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 C8orf59Q8N0T1 100 aaPredicted RBP6.17□□□□□ -1.42
CD44-211ENST00000442151 JAGN1Q8N5M9 183 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 OR10K1Q8NGX5 313 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 GHITMQ9H3K2 345 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 ABRACLQ9P1F3 81 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 GNG12Q9UBI6 72 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 AASSQ9UDR5 926 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 PEX16Q9Y5Y5 336 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 WNK1Q9H4A3 2382 aa6.17□□□□□ -1.42
CD44-211ENST00000442151 PRKDCP78527 4128 aaKnown RBP6.16□□□□□ -1.42
CD44-211ENST00000442151 A0A1W2PPI3 338 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 MPIG6BO95866 241 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 JUNBP17275 347 aaPredicted RBP6.16□□□□□ -1.42
CD44-211ENST00000442151 FOXE3Q13461 319 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 GPR50Q13585 617 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 HNF4GQ14541 408 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 TMEM95Q3KNT9 176 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 LY6G6FQ5SQ64 297 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 SYT6Q5T7P8 510 aaPredicted RBP6.16□□□□□ -1.42
CD44-211ENST00000442151 AWAT2Q6E213 333 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 GLIPR1L1Q6UWM5 242 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 BAIAP2L2Q6UXY1 529 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 Q6ZPA2 131 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 ZNF695Q8IW36 515 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 PLPPR1Q8TBJ4 325 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 CCDC107Q8WV48 283 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 APH1BQ8WW43 257 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 EAF1Q96JC9 268 aaPredicted RBP6.16□□□□□ -1.42
CD44-211ENST00000442151 ABCG5Q9H222 651 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 RIMS4Q9H426 269 aaPredicted RBP6.16□□□□□ -1.42
CD44-211ENST00000442151 SCN3BQ9NY72 215 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 ZNF580Q9UK33 172 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 MGAT4AQ9UM21 535 aa6.16□□□□□ -1.42
CD44-211ENST00000442151 LANCL1O43813 399 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 WBP4O75554 376 aaKnown RBP6.15□□□□□ -1.42
CD44-211ENST00000442151 BPNT1O95861 308 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 AMY1AP04745 511 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 AMY2AP04746 511 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 NHLRC4P0CG21 123 aaPredicted RBP6.15□□□□□ -1.42
CD44-211ENST00000442151 SSTR5P35346 364 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms