RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TNFRSF19Q9NS68 423 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 KCNIP1Q9NZI2 227 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 DPM3Q9P2X0 92 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 DAPK2Q9UIK4 370 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 VPREB3Q9UKI3 123 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 AMMECR1Q9Y4X0 333 aaPredicted RBP9.57□□□□□ -0.88
HSPG2-206ENST00000439717 TRBV6-6A0A0A6YYG2 114 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 A0A0B4J203 849 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 SMIM30A4D0T7 59 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 FAM172BPA6NC97 362 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 BUB1B-PAK6H3BSN5 160 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 H3BUX3 64 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 J3QR06 171 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 SDCBPO00560 298 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-206ENST00000439717 NAPSAO96009 420 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 HBZP02008 142 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 CRYBA1P05813 215 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 RCC1P18754 421 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-206ENST00000439717 COMPP49747 757 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-206ENST00000439717 DYNLT3P51808 116 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 EFNB2P52799 333 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 MXD1Q05195 221 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 PLA2G7Q13093 441 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 SSX2Q16385 188 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 LTC4SQ16873 150 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 HLA-DRB5Q30154 266 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 MOB1BQ7L9L4 216 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 C8orf31Q8N9H6 132 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 GCDHQ92947 438 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-206ENST00000439717 ARHGAP5-AS1Q96IT6 56 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 FUNDC2Q9BWH2 189 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 PECRQ9BY49 303 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 MMP28Q9H239 520 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 TAF9BQ9HBM6 251 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 CHMP1AQ9HD42 196 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-206ENST00000439717 ABCB10Q9NRK6 738 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 GFOD1Q9NXC2 390 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 AK3Q9UIJ7 227 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 MGAT4AQ9UM21 535 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 PSG11Q9UQ72 335 aa9.56□□□□□ -0.88
HSPG2-206ENST00000439717 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 OOSP1A8MZH6 123 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 LY6LH3BQJ8 138 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 RAB27BO00194 218 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 GPR137BO60478 399 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 SCGNO76038 276 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 CLEC2LP0C7M8 214 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 ARHGDIBP52566 201 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 LOXL3P58215 753 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 HTD2P86397 168 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 FOXL1Q12952 345 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 ARL6IP1Q15041 203 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 PLAC9Q5JTB6 97 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 ZNF880Q6PDB4 577 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 LIAT1Q6ZQX7 453 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 DYNAPQ8N1N2 210 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 LINC00311Q8N616 119 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 OR10R2Q8NGX6 335 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 RAB3CQ96E17 227 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 RAB18Q9NP72 206 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 C12orf4Q9NQ89 552 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 HILPDAQ9Y5L2 63 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 ETV7Q9Y603 341 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 COL6A5A8TX70 2615 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 KIAA2026Q5HYC2 2103 aa9.55□□□□□ -0.88
HSPG2-206ENST00000439717 SNRPBP14678 240 aaKnown RBP9.54□□□□□ -0.88
HSPG2-206ENST00000439717 HIST1H1DP16402 221 aaKnown RBP9.54□□□□□ -0.88
HSPG2-206ENST00000439717 PAX6P26367 422 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 LSM3P62310 102 aaKnown RBP9.54□□□□□ -0.88
HSPG2-206ENST00000439717 HMGN3Q15651 99 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 UTF1Q5T230 341 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 IDNKQ5T6J7 187 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 TPTE2P1Q5T6R2 138 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 STEAP3Q658P3 488 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 CCDC144NLQ6NUI1 221 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 PRR18Q8N4B5 295 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 OR10X1Q8NGY0 326 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 OR1L1Q8NH94 360 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 LGALS14Q8TCE9 139 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 PIFOQ8TCI5 191 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 LEAP2Q969E1 77 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 GALMQ96C23 342 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 CYYR1Q96J86 154 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 CMSS1Q9BQ75 279 aaKnown RBP9.54□□□□□ -0.88
HSPG2-206ENST00000439717 ATG5Q9H1Y0 275 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 ABRACLQ9P1F3 81 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 GNG12Q9UBI6 72 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 PITPNC1Q9UKF7 332 aa9.54□□□□□ -0.88
HSPG2-206ENST00000439717 SERPINE3A8MV23 424 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 MFNGO00587 321 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 NDUFA7O95182 113 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 IGHV3-7P01780 117 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 TFAP2AP05549 437 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 CD3GP09693 182 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 IL3RAP26951 378 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 BRS3P32247 399 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 RPS19P39019 145 aaKnown RBP9.53□□□□□ -0.88
HSPG2-206ENST00000439717 MNDAP41218 407 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 ALDH3B2P48448 385 aa9.53□□□□□ -0.88
HSPG2-206ENST00000439717 GNG10P50151 68 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms