RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TRDV1A0A1B0GX56 115 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 TMEM14DPA8MWL7 114 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 C15orf65H3BRN8 121 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 M0QZ24 198 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 GAPDHP04406 335 aaKnown RBP8.42□□□□□ -1.06
MCF2L-216ENST00000439475 BLVRBP30043 206 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-216ENST00000439475 GNG10P50151 68 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 PRR31Q5SQ13 230 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 OR10K2Q6IF99 312 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 CCBE1Q6UXH8 406 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-216ENST00000439475 TMEM219Q86XT9 240 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 THNSL2Q86YJ6 484 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 SPARTQ8N0X7 666 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 OR8H3Q8N146 312 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 GAPTQ8N292 157 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 LINC00311Q8N616 119 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 CITED1Q99966 193 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 RIMS4Q9H426 269 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-216ENST00000439475 LIN7BQ9HAP6 207 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 GFOD1Q9NXC2 390 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 GNG12Q9UBI6 72 aa8.42□□□□□ -1.06
MCF2L-216ENST00000439475 DNHD1Q96M86 4753 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 TRAV1-2A0A0B4J238 106 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 LY6LH3BQJ8 138 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 M0QZK8 103 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 RGS11O94810 467 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 IGHV3-7P01780 117 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 PSMB9P28065 219 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 CHATP28329 748 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 EFNB2P52799 333 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 HERPUD1Q15011 391 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 UBE2UQ5VVX9 321 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 STEAP3Q658P3 488 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 SIGIRRQ6IA17 410 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 PRR18Q8N4B5 295 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 C8orf31Q8N9H6 132 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 LEAP2Q969E1 77 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 SLC25A33Q9BSK2 321 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 TAF9BQ9HBM6 251 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 CHMP1AQ9HD42 196 aaPredicted RBP8.41□□□□□ -1.06
MCF2L-216ENST00000439475 OR2S2Q9NQN1 319 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 MBNL3Q9NUK0 354 aaKnown RBP8.41□□□□□ -1.06
MCF2L-216ENST00000439475 NDUFB11Q9NX14 153 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 ABRACLQ9P1F3 81 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 STEAP1Q9UHE8 339 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 RAB22AQ9UL26 194 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 SSR3Q9UNL2 185 aa8.41□□□□□ -1.06
MCF2L-216ENST00000439475 IGHV3-43A0A0B4J1X8 118 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 C12orf77C9JDV5 145 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 TXNL1O43396 289 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 CHST1O43916 411 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 OR2F2O95006 317 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 HBZP02008 142 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 IGHV3-43DP0DP04 118 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 VSIG10L2P0DP72 767 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 RAB3BP20337 219 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 MRPS15P82914 257 aaKnown RBP8.4□□□□□ -1.06
MCF2L-216ENST00000439475 HES1Q14469 280 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 P2RY14Q15391 338 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 SSX1Q16384 188 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 C2orf76Q3KRA6 126 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 CD200R1LQ6Q8B3 271 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 TREML4Q6UXN2 200 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 C6orf201Q7Z4U5 140 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 MOB3BQ86TA1 216 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 OR51D1Q8NGF3 324 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 OR56B1Q8NGI3 324 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 FAM3DQ96BQ1 224 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 GALMQ96C23 342 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 RBM14Q96PK6 669 aaKnown RBP8.4□□□□□ -1.06
MCF2L-216ENST00000439475 FAAP24Q9BTP7 215 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 LPAR5Q9H1C0 372 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 HSF4Q9ULV5 492 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 MGAT4AQ9UM21 535 aa8.4□□□□□ -1.06
MCF2L-216ENST00000439475 A0A1W2PPE3 182 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 METTL21EPA6NDL7 271 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 FAM90A9PA6NNJ1 464 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 HSD17B6O14756 317 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 TMEM11P17152 192 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 JUNBP17275 347 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-216ENST00000439475 RCC1P18754 421 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-216ENST00000439475 CD24P25063 80 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 FGF9P31371 208 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-216ENST00000439475 VDAC2P45880 294 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-216ENST00000439475 VEGFCP49767 419 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 LOXL3P58215 753 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 BLCAPP62952 87 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 QRFPP83859 136 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 HTD2P86397 168 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 SRSF4Q08170 494 aaKnown RBP8.39□□□□□ -1.07
MCF2L-216ENST00000439475 ZNF816Q0VGE8 651 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-216ENST00000439475 UNC119Q13432 240 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 MORN2Q502X0 79 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 HES5Q5TA89 166 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 ZNF773Q6PK81 442 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 Q8N2B8 174 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 FAM89BQ8N5H3 189 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 KLHDC1Q8N7A1 406 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 OR1L1Q8NH94 360 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms