RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 IGKV1D-33P01593 117 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 IGKV1-33P01594 117 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 PF4P02776 101 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 UBBP0CG47 229 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 LOXL3P58215 753 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 HNF4GQ14541 408 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 SYT6Q5T7P8 510 aaPredicted RBP13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 C5orf56Q8N8D9 126 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 WFDC9Q8NEX5 89 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 SGCDQ92629 289 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 FKBP14Q9NWM8 211 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 SCN3BQ9NY72 215 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 GNG12Q9UBI6 72 aa13.94□□□□□ -0.18
SBDSP1-203ENST00000437201 PLXNB1O43157 2135 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 A0A1W2PPE3 182 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 SH2D7A6NKC9 451 aaPredicted RBP13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 CDK1P06493 297 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 SLC35B1P78383 322 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 GPR50Q13585 617 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 EBI3Q14213 229 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 DIAPH2-AS1Q14236 149 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 FBLN7Q53RD9 439 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 OXLD1Q5BKU9 147 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 TCTEX1D4Q5JR98 221 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 KHDC1LQ5JSQ8 128 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 STEAP3Q658P3 488 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 OR2T10Q8NGZ9 312 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 BANF2Q9H503 90 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 NECAP2Q9NVZ3 263 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 KCNIP1Q9NZI2 227 aa13.93□□□□□ -0.18
SBDSP1-203ENST00000437201 SERPINE3A8MV23 424 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 C12orf77C9JDV5 145 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 PTGES3LE9PB15 166 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 PIN1P1O15428 100 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 SC5DO75845 299 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 CD1BP29016 333 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 SLC35A2P78381 396 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 ACSM3Q53FZ2 586 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 GLT8D1Q68CQ7 371 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 ZNF554Q86TJ5 538 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 FOXRED2Q8IWF2 684 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 IZUMO1Q8IYV9 350 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 GAPTQ8N292 157 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 COMMD1Q8N668 190 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 OR4K15Q8NH41 348 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 PHYHIPQ92561 330 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 Q96M66 194 aa13.92□□□□□ -0.18
SBDSP1-203ENST00000437201 NCBP2LA6PVI3 153 aaKnown RBP13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 H0YHG0 523 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 PDCD6O75340 191 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 DUS4LO95620 317 aaKnown RBP13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 SLC6A1P30531 599 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 REG1BP48304 166 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 GABPB1Q06547 395 aaPredicted RBP13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 SPHARQ15513 63 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 C6orf141Q5SZD1 244 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 UNQ9370/PRO34162Q6UXP9 181 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 SLC25A48Q6ZT89 311 aaKnown RBP13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 SLC35E3Q7Z769 313 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 LYPD6Q86Y78 171 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 TGIF2LXQ8IUE1 241 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 TMEM104Q8NE00 496 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 OR51D1Q8NGF3 324 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 OR8H1Q8NGG4 311 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 UBALD1Q8TB05 177 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 RTN4IP1Q8WWV3 396 aaPredicted RBP13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 GON7Q9BXV9 100 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 LRRC42Q9Y546 428 aa13.91□□□□□ -0.18
SBDSP1-203ENST00000437201 IGHV3-43A0A0B4J1X8 118 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 MOSP00540 346 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 IGHG2P01859 326 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 HBZP02008 142 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 IGHV3-43DP0DP04 118 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 PRR18Q8N4B5 295 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 ST6GALNAC6Q969X2 333 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 PHF21AQ96BD5 680 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 RCC1LQ96I51 464 aaKnown RBP13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 EAF1Q96JC9 268 aaPredicted RBP13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 NEDD4LQ96PU5 975 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 ZFP57Q9NU63 452 aa13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 LIN7CQ9NUP9 197 aaKnown RBP13.9□□□□□ -0.18
SBDSP1-203ENST00000437201 UBE2QL1A1L167 161 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 ZNF137PP52743 207 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 MED22Q15528 200 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 ZNF329Q86UD4 541 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 KCNG3Q8TAE7 436 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 FAM46BQ96A09 425 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 TMED9Q9BVK6 235 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 GPR61Q9BZJ8 451 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 TAF9BQ9HBM6 251 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 OR2S2Q9NQN1 319 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 MBNL3Q9NUK0 354 aaKnown RBP13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 TPRKBQ9Y3C4 175 aa13.89□□□□□ -0.19
SBDSP1-203ENST00000437201 IGHV3-72A0A0B4J1Y9 119 aa13.88□□□□□ -0.19
SBDSP1-203ENST00000437201 AP4M1O00189 453 aa13.88□□□□□ -0.19
SBDSP1-203ENST00000437201 RGS11O94810 467 aa13.88□□□□□ -0.19
SBDSP1-203ENST00000437201 MPIG6BO95866 241 aa13.88□□□□□ -0.19
SBDSP1-203ENST00000437201 RCC1P18754 421 aaPredicted RBP13.88□□□□□ -0.19
SBDSP1-203ENST00000437201 SRMP19623 302 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms