RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 NEK7Q8TDX7 302 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 DLX4Q92988 240 aaPredicted RBP8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 CHCHD6Q9BRQ6 235 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 IMPAD1Q9NX62 359 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 ZNF580Q9UK33 172 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 ING4Q9UNL4 249 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 ST3GAL6Q9Y274 331 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 J3QRE1 110 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 CDRT1O95170 752 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 SLURP1P55000 103 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 MMDQ15546 238 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 ATAD3CQ5T2N8 411 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 ADAMTSL5Q6ZMM2 481 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 SLC25A48Q6ZT89 311 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 OR51A2Q8NGJ7 313 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 OR6Q1Q8NGQ2 317 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 OR52N1Q8NH53 320 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 OR5AK2Q8NH90 309 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 MRPL48Q96GC5 212 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 GABARAPL3Q9BY60 117 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 ALX4Q9H161 411 aaPredicted RBP8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 GHITMQ9H3K2 345 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 PARP11Q9NR21 331 aa8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 CHCHD3Q9NX63 227 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-207ENST00000435083 TRAV41A0A0B4J266 112 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 ATP6V0E1O15342 81 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 ORC5O43913 435 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 IGLV1-40P01703 118 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 CSTBP04080 98 aaKnown RBP8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 VHLP40337 213 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 SOX2P48431 317 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 RAB9AP51151 201 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 RBM11P57052 281 aaKnown RBP8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 GALEQ14376 348 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 ASCL4Q6XD76 172 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 LHFPL3Q86UP9 236 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 OR10V1Q8NGI7 309 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 TRUB1Q8WWH5 349 aaKnown RBP8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 ISOC1Q96CN7 298 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 SLC7A6OSQ96CW6 309 aaPredicted RBP8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 PDCD1LG2Q9BQ51 273 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 METTL9Q9H1A3 318 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 OR51J1Q9H342 316 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 ISG20L2Q9H9L3 353 aaKnown RBP8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 GNG12Q9UBI6 72 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 AP4S1Q9Y587 144 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
CHRNA1-207ENST00000435083 TMEM212A6NML5 194 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 E9PI62 339 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 LINC01619G3V211 115 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 AIPO00170 330 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 GEMIN2O14893 280 aaKnown RBP8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 LDLRAD4O15165 306 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 MT-ND4P03905 459 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 RPSAP08865 295 aaKnown RBP8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 ZNF134P52741 427 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 ZNF137PP52743 207 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 LSAMPQ13449 338 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 Q3ZCU0 254 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 CT45A1Q5HYN5 189 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 PRR18Q8N4B5 295 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 STX19Q8N4C7 294 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 ZNF439Q8NDP4 499 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 CT45A3Q8NHU0 189 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 S100A13Q99584 98 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 TM2D3Q9BRN9 247 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 ALG8Q9BVK2 526 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 IFT22Q9H7X7 185 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 TAS2R4Q9NYW5 299 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 TRAPPC2LQ9UL33 140 aa8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 EXOGQ9Y2C4 368 aaKnown RBP8.97□□□□□ -0.97
CHRNA1-207ENST00000435083 MAGEA13PA6NCF6 341 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 FAM90A10PA6NDY2 464 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 C12orf77C9JDV5 145 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 ANKRD65E5RJM6 399 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 SPINT2O43291 252 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 SERPINA2P20848 420 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 CNTFRP26992 372 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 BLVRBP30043 206 aaPredicted RBP8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 NHLRC3Q5JS37 347 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 MEDAGQ5VYS4 303 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 ACSM6Q6P461 480 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 ZNF497Q6ZNH5 498 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 ARPC1AQ92747 370 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 OR4C12Q96R67 309 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 MYCBPQ99417 103 aaPredicted RBP8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 ZNF251Q9BRH9 671 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 OAZ3Q9UMX2 235 aa8.96□□□□□ -0.97
CHRNA1-207ENST00000435083 IGHV4OR15-8A0A075B7B6 117 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 A0A087WW49 117 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 IGHV7-81A0A0B4J1V7 117 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 SAC3D1A6NKF1 404 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 LANCL1O43813 399 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 HLA-DRB1P01911 266 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 IGHV4-30-4P0DP06 118 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 GBX2P52951 348 aaPredicted RBP8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 ACTBP60709 375 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 PITPNAQ00169 270 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 ECSCRQ19T08 205 aa8.95□□□□□ -0.98
CHRNA1-207ENST00000435083 MPV17LQ2QL34 196 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms