RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PAX6P26367 422 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 TALDO1P37837 337 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 CEACAM3P40198 252 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 ARHGDIBP52566 201 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 SLC9A3R2Q15599 337 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 MOGAT2Q3SYC2 334 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 MOB1BQ7L9L4 216 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 ANKRD13BQ86YJ7 626 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 CLVS1Q8IUQ0 354 aaPredicted RBP12.61□□□□□ -0.39
TREX1-201ENST00000433541 OR10V1Q8NGI7 309 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 OR10X1Q8NGY0 326 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 OR1L1Q8NH94 360 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 IL1F10Q8WWZ1 152 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 SSX3Q99909 188 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 HDHD3Q9BSH5 251 aaPredicted RBP12.61□□□□□ -0.39
TREX1-201ENST00000433541 RIMS4Q9H426 269 aaPredicted RBP12.61□□□□□ -0.39
TREX1-201ENST00000433541 RHBDL2Q9NX52 303 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 AMMECR1Q9Y4X0 333 aaPredicted RBP12.61□□□□□ -0.39
TREX1-201ENST00000433541 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 NPIPB11E5RHQ5 1161 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 H3BUX3 64 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 CGB3P0DN86 165 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 CGB7P0DN87 165 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 HIST1H1DP16402 221 aaKnown RBP12.6□□□□□ -0.39
TREX1-201ENST00000433541 RPL5P46777 297 aaKnown RBP12.6□□□□□ -0.39
TREX1-201ENST00000433541 ALDH3B2P48448 385 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 TMEM50BP56557 158 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 ARL6IP1Q15041 203 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 LRRC75BQ2VPJ9 315 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 KRTAP24-1Q3LI83 254 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 PLAC9Q5JTB6 97 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 MINOS1Q5TGZ0 78 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 BEND2Q8NDZ0 799 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 OR5H6Q8NGV6 325 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 CREB3L1Q96BA8 519 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 GALMQ96C23 342 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 OR2S2Q9NQN1 319 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 POMT1Q9Y6A1 747 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 MINOS1-NBL1R4GNA1 71 aa12.6□□□□□ -0.39
TREX1-201ENST00000433541 A0A1W2PPE3 182 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 LEUTXA8MZ59 168 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 C15orf65H3BRN8 121 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 GABARAPO95166 117 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 IER3P46695 156 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 SCAND1P57086 179 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 LY6EQ16553 131 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 HLA-DRB5Q30154 266 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 OLFML2AQ68BL7 652 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 SLC16A12Q6ZSM3 486 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 GAPTQ8N292 157 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
TREX1-201ENST00000433541 TOMM40LQ969M1 308 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 SLC25A46Q96AG3 418 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 C19orf24Q9BVV8 132 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 MMP28Q9H239 520 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 DCSTAMPQ9H295 470 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 MBNL3Q9NUK0 354 aaKnown RBP12.59□□□□□ -0.39
TREX1-201ENST00000433541 GFOD1Q9NXC2 390 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 DPM3Q9P2X0 92 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 MGAT4AQ9UM21 535 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 PSG11Q9UQ72 335 aa12.59□□□□□ -0.39
TREX1-201ENST00000433541 FOXI3A8MTJ6 420 aaPredicted RBP12.58□□□□□ -0.4
TREX1-201ENST00000433541 SERPINE3A8MV23 424 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 J3QR06 171 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 RAB27BO00194 218 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 F2RL2O00254 374 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 HSPA12AO43301 675 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 TMEM127O75204 238 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 NAPSAO96009 420 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 RNASE1P07998 156 aaKnown RBP12.58□□□□□ -0.4
TREX1-201ENST00000433541 CD34P28906 385 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 RORCP51449 518 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 KRTAP21-3Q3LHN1 58 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 TMEM30BQ3MIR4 351 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 CDNFQ49AH0 187 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 C16orf87Q6PH81 154 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 ZNF554Q86TJ5 538 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 IZUMO1Q8IYV9 350 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 TMEM86BQ8N661 226 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 SAMD12Q8N8I0 201 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 OR52M1Q8NGK5 317 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 OR4P4Q8NGL7 312 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 OR5R1Q8NH85 324 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 FAM216AQ8WUB2 273 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 ZFAND2BQ8WV99 257 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 GCDHQ92947 438 aaPredicted RBP12.58□□□□□ -0.4
TREX1-201ENST00000433541 RPEQ96AT9 228 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 CHIAQ9BZP6 476 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 PRDM13Q9H4Q3 707 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 LINC00574Q9H8X3 128 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 DIABLOQ9NR28 239 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 COMMD3Q9UBI1 195 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 SPATA2Q9UM82 520 aa12.58□□□□□ -0.4
TREX1-201ENST00000433541 A0A087X0M5 115 aa12.57□□□□□ -0.4
TREX1-201ENST00000433541 A0A1B0GX30 115 aa12.57□□□□□ -0.4
TREX1-201ENST00000433541 BUB1B-PAK6H3BSN5 160 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms