RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SERPINA2P20848 420 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 ZNF134P52741 427 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 CFHR3Q02985 330 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 FOXE3Q13461 319 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 ATAD3CQ5T2N8 411 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 IZUMO1Q8IYV9 350 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 CBR4Q8N4T8 237 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 RASL11BQ9BPW5 248 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 KLK15Q9H2R5 256 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 RAB9BQ9NP90 201 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 TMEM138Q9NPI0 162 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 GFOD1Q9NXC2 390 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 RYR2Q92736 4967 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 MOSP00540 346 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 DCKP27707 260 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 RBM11P57052 281 aaKnown RBP12.91□□□□□ -0.34
VARS-216ENST00000428445 MPV17LQ2QL34 196 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 OR11H1Q8NG94 326 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 OR10V1Q8NGI7 309 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 OR52I1Q8NGK6 324 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 OR52N1Q8NH53 320 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 KCTD7Q96MP8 289 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 S100A13Q99584 98 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 GNB4Q9HAV0 340 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 FGF20Q9NP95 211 aaPredicted RBP12.91□□□□□ -0.34
VARS-216ENST00000428445 WSB1Q9Y6I7 421 aa12.91□□□□□ -0.34
VARS-216ENST00000428445 TENM2Q9NT68 2774 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 TMEM30CPA0ZSE6 113 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 LY86O95711 162 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 MT-ND4P03905 459 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 ELANEP08246 267 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 SLC2A2P11168 524 aaPredicted RBP12.9□□□□□ -0.34
VARS-216ENST00000428445 MYF6P23409 242 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 CD1BP29016 333 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 ZNF93P35789 620 aaPredicted RBP12.9□□□□□ -0.34
VARS-216ENST00000428445 VHLP40337 213 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 GPR176Q14439 515 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 TMEM30BQ3MIR4 351 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 TMPRSS11AQ6ZMR5 421 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 PRR18Q8N4B5 295 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 RNF152Q8N8N0 203 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 OR8H1Q8NGG4 311 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 NEK7Q8TDX7 302 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 RITA1Q96K30 269 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 SPACA1Q9HBV2 294 aa12.9□□□□□ -0.34
VARS-216ENST00000428445 SIRT4Q9Y6E7 314 aaPredicted RBP12.9□□□□□ -0.34
VARS-216ENST00000428445 SORL1Q92673 2214 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 IRGMA1A4Y4 181 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 G3V318 75 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 GPX5O75715 221 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 IGHG4P01861 327 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 LIMS3P0CW19 117 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 LIMS4P0CW20 117 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 VDAC1P21796 283 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 IL3RAP26951 378 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 CNTFRP26992 372 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 PPP3R1P63098 170 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 KIAA0141Q14154 515 aaPredicted RBP12.89□□□□□ -0.35
VARS-216ENST00000428445 CT45A1Q5HYN5 189 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 DDI2Q5TDH0 399 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 STEAP3Q658P3 488 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 FAM71E2Q8N5Q1 922 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 OR13C5Q8NGS8 318 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 OR4K15Q8NH41 348 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 CT45A3Q8NHU0 189 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 C4orf3Q8WVX3 66 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 TMEM106AQ96A25 262 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 MRPS24Q96EL2 167 aaKnown RBP12.89□□□□□ -0.35
VARS-216ENST00000428445 CHCHD6Q9BRQ6 235 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 BABAM2Q9NXR7 383 aa12.89□□□□□ -0.35
VARS-216ENST00000428445 MAGEA13PA6NCF6 341 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 C12orf77C9JDV5 145 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 AIPO00170 330 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 OGG1O15527 345 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 TXNL1O43396 289 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 GTF2F2P13984 249 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 PSMB8P28062 276 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 BDKRB2P30411 391 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 SOX6P35712 828 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 GNB1P62873 340 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 SLC22A6Q4U2R8 563 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 SYT6Q5T7P8 510 aaPredicted RBP12.88□□□□□ -0.35
VARS-216ENST00000428445 ZNF497Q6ZNH5 498 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 OVCH2Q7RTZ1 564 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 SBSPONQ8IVN8 264 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 CDH26Q8IXH8 852 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 STX19Q8N4C7 294 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 ZNF439Q8NDP4 499 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 OR1L1Q8NH94 360 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 RDH12Q96NR8 316 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
VARS-216ENST00000428445 STAB2Q8WWQ8 2551 aa12.88□□□□□ -0.35
VARS-216ENST00000428445 C3orf84H3BNL1 204 aa12.87□□□□□ -0.35
VARS-216ENST00000428445 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
VARS-216ENST00000428445 ADARB1P78563 741 aaKnown RBP12.87□□□□□ -0.35
VARS-216ENST00000428445 FHL3Q13643 280 aa12.87□□□□□ -0.35
VARS-216ENST00000428445 SMN1Q16637 294 aaKnown RBP12.87□□□□□ -0.35
VARS-216ENST00000428445 OR2G6Q5TZ20 316 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms