RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 THADAQ6YHU6 1953 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 TRBV5-7A0A0A0MS05 114 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 ADAP1O75689 374 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 PDGFAP04085 211 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 FAM27E3Q08E93 113 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 NRN1LQ496H8 165 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 C1orf100Q5SVJ3 147 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 TPRX1Q8N7U7 411 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 BPIFCQ8NFQ6 507 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 KLF9Q13886 244 aaPredicted RBP11.97□□□□□ -0.49
RPL28-202ENST00000426763 FNDC7Q5VTL7 733 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 FDX2Q6P4F2 183 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 SEZ6L2Q6UXD5 910 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 OR1L4Q8NGR5 311 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 SEMA7AO75326 666 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 CPN1P15169 458 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 MMDQ15546 238 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 NSUN5P2Q63ZY6 315 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 MITD1Q8WV92 249 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 DHRS9Q9BPW9 319 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 LPAR5Q9H1C0 372 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 OR1A1Q9P1Q5 309 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 MIOXQ9UGB7 285 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 APOBEC3AP31941 199 aaPredicted RBP11.97□□□□□ -0.49
RPL28-202ENST00000426763 GLRXP35754 106 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 GFRA1P56159 465 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 POLR2GP62487 172 aaKnown RBP eCLIP11.97□□□□□ -0.49
RPL28-202ENST00000426763 IL24Q13007 206 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 SMIM7Q9BQ49 75 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 SLC45A2Q9UMX9 530 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 LOC390937A0A1W2PQ73 354 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 HBZP02008 142 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 PDLIM4P50479 330 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 SSTP61278 116 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 ZNF680Q8NEM1 530 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 DTD1Q8TEA8 209 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 CHRDL1Q9BU40 450 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 TXNL1O43396 289 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 CYB5R3P00387 301 aaPredicted RBP11.96□□□□□ -0.49
RPL28-202ENST00000426763 INHBBP09529 407 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 AARDQ4LEZ3 155 aa11.96□□□□□ -0.49
RPL28-202ENST00000426763 IGLV3-32A0A0A0MS00 114 aa11.96□□□□□ -0.5
RPL28-202ENST00000426763 LRRC3CA6NJW4 275 aa11.96□□□□□ -0.5
RPL28-202ENST00000426763 LMX1BO60663 402 aa11.96□□□□□ -0.5
RPL28-202ENST00000426763 TAGLNQ01995 201 aaKnown RBP11.96□□□□□ -0.5
RPL28-202ENST00000426763 LINC00114Q6XXX2 140 aa11.96□□□□□ -0.5
RPL28-202ENST00000426763 CCL19Q99731 98 aa11.96□□□□□ -0.5
RPL28-202ENST00000426763 KLK13Q9UKR3 277 aa11.96□□□□□ -0.5
RPL28-202ENST00000426763 A0A1W2PPE3 182 aa11.96□□□□□ -0.5
RPL28-202ENST00000426763 ENDOGQ14249 297 aaKnown RBP11.96□□□□□ -0.5
RPL28-202ENST00000426763 RHOFQ9HBH0 211 aa11.96□□□□□ -0.5
RPL28-202ENST00000426763 IGHV1-69-2A0A0G2JMI3 117 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 GAPDHP04406 335 aaKnown RBP11.95□□□□□ -0.5
RPL28-202ENST00000426763 LHX2P50458 406 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 COL4A6Q14031 1691 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 CLDN18P56856 261 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 BTNL8Q6UX41 500 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 MRGPRFQ96AM1 343 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 RHOBP62745 196 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 FAM219AQ8IW50 185 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 OR10A7Q8NGE5 316 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 GAB2Q9UQC2 676 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 SCN2AQ99250 2005 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 P2RY1P47900 373 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 REG1BP48304 166 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 OR5I1Q13606 314 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 RPL7L1Q6DKI1 246 aaKnown RBP11.95□□□□□ -0.5
RPL28-202ENST00000426763 OR1L8Q8NGR8 309 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 OR5B3Q8NH48 314 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 PLXNA3P51805 1871 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 A0A1W2PP11 408 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 GNG7O60262 68 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 CD40P25942 277 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 BAGE3Q86Y29 109 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 BAGE2Q86Y30 109 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 TMEM231Q9H6L2 316 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
RPL28-202ENST00000426763 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
RPL28-202ENST00000426763 G6PCP35575 357 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 ZNF90Q03938 601 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 PHYHD1Q5SRE7 291 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 C9orf106Q8NAJ2 232 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 ZNF426Q9BUY5 554 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 FAM186AA6NE01 2351 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 SMPD2O60906 423 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 CDS2O95674 445 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 CECR9P0C854 216 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 LYZP61626 148 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 PRR13Q9NZ81 148 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 A0A1B0GU03 582 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 DNASE2O00115 360 aaPredicted RBP11.94□□□□□ -0.5
RPL28-202ENST00000426763 CHEK1O14757 476 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 COMMD1Q8N668 190 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 BCL2L2Q92843 193 aaPredicted RBP11.94□□□□□ -0.5
RPL28-202ENST00000426763 RNF2Q99496 336 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 EP300Q09472 2414 aaPredicted RBP11.94□□□□□ -0.5
RPL28-202ENST00000426763 DUXBA0A1W2PPF3 345 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 NEURL1O76050 574 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 CRYBA2P53672 197 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms