RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 NAAAQ02083 359 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 ZNF239Q16600 458 aaKnown RBP11.47□□□□□ -0.57
USP42-203ENST00000426246 ZNF826PQ6ZT77 177 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 ASB13Q8WXK3 278 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 RAB39BQ96DA2 213 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 CDIPTO14735 213 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 DEGS1O15121 323 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 FABP4P15090 132 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 RBM11P57052 281 aaKnown RBP11.47□□□□□ -0.57
USP42-203ENST00000426246 DHRS13Q6UX07 377 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 SMIM8Q96KF7 97 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 SIGLEC12Q96PQ1 595 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 NCKAP5O14513 1909 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 HOXA1P49639 335 aaPredicted RBP11.47□□□□□ -0.57
USP42-203ENST00000426246 BTNL8Q6UX41 500 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 TMEM171Q8WVE6 324 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 SLC25A22Q9H936 323 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 A0A0U1RQV5 110 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 IFNA17P01571 189 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 TRGC2P03986 189 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 APLNRP35414 380 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 FAM209BQ5JX69 171 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 ZDHHC23Q8IYP9 409 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 FAM89BQ8N5H3 189 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 OR1J1Q8NGS3 322 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 VSIRQ9H7M9 311 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 PARP11Q9NR21 331 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 TNCP24821 2201 aa11.46□□□□□ -0.57
USP42-203ENST00000426246 PRR33A8MZF0 331 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 GABRA2P47869 451 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 NKX6-1P78426 367 aaPredicted RBP11.46□□□□□ -0.58
USP42-203ENST00000426246 ZNF561Q8N587 486 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 APH1AQ96BI3 265 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 PRSS50Q9UI38 385 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 SYNGR3O43761 229 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 P2RY1P47900 373 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 ZNF266Q14584 549 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 HES3Q5TGS1 186 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 CDPF1Q6NVV7 123 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 SNX22Q96L94 193 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 GPR61Q9BZJ8 451 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 GLRX2Q9NS18 164 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 DUSP13Q9UII6 198 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 ZDHHC8Q9ULC8 765 aa11.46□□□□□ -0.58
USP42-203ENST00000426246 OR6C6A6NF89 314 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 MT-ND4LP03901 98 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 PRSS33Q8NF86 280 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 CHD3Q12873 2000 aaKnown RBP11.45□□□□□ -0.58
USP42-203ENST00000426246 AGFG2O95081 481 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 CLN3Q13286 438 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 SSPNQ14714 243 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 C20orf204Q6ZNR8 217 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 FRZBQ92765 325 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 MTCH1Q9NZJ7 389 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 WASF3Q9UPY6 502 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 CARHSP1Q9Y2V2 147 aaKnown RBP11.45□□□□□ -0.58
USP42-203ENST00000426246 IGHEP01854 428 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 PCBD1P61457 104 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 CST9LP1Q5W188 147 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 SPIN2AQ99865 258 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 SPIN2BQ9BPZ2 258 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 TMEM100Q9NV29 134 aa11.45□□□□□ -0.58
USP42-203ENST00000426246 OPN1MWP04001 364 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 OPN1MW2P0DN77 364 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 OPN1MW3P0DN78 364 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 IL2RGP31785 369 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 EIF3IQ13347 325 aaKnown RBP11.44□□□□□ -0.58
USP42-203ENST00000426246 TRIP6Q15654 476 aaKnown RBP11.44□□□□□ -0.58
USP42-203ENST00000426246 ZNF787Q6DD87 383 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 SLC25A31Q9H0C2 315 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 A0A0G2JRQ6 117 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 TMEM50AO95807 157 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 CD55P08174 381 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 DANCRP0C864 163 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 CEACAM6P40199 344 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 ANGPTL4Q9BY76 406 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 PSENENQ9NZ42 101 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 V9GYS6 101 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 ADGRG4Q8IZF6 3080 aa11.44□□□□□ -0.58
USP42-203ENST00000426246 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 ZNF503-AS2A6NEH8 195 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 CLN5O75503 358 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 MSI2Q96DH6 328 aaKnown RBP11.43□□□□□ -0.58
USP42-203ENST00000426246 PLEKHF2Q9H8W4 249 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 IL17BQ9UHF5 180 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 TINAGQ9UJW2 476 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 PTPRBP23467 1997 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 CUL9Q8IWT3 2517 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 TRBV6-7A0A0A0MS04 114 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 SLC22A20A6NK97 555 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 CELA3BP08861 270 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 H3F3AP84243 136 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 TMEM37Q8WXS4 190 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 MSL2Q9HCI7 577 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 BAXQ07812 192 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 OR1C1Q15619 314 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 CRIP3Q6Q6R5 217 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 NUFIP2Q7Z417 695 aaKnown RBP11.43□□□□□ -0.58
USP42-203ENST00000426246 DMBX1Q8NFW5 382 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms