RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-204ENST00000417122 CNBD2Q96M20 576 aa12.48□□□□□ -0.41
ITGB1-204ENST00000417122 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
ITGB1-204ENST00000417122 ISYNA1Q9NPH2 558 aa12.48□□□□□ -0.41
ITGB1-204ENST00000417122 GFOD1Q9NXC2 390 aa12.48□□□□□ -0.41
ITGB1-204ENST00000417122 MGAM2Q2M2H8 2515 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 IGHV3-43A0A0B4J1X8 118 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 A0A1W2PPI3 338 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 UBE2QL1A1L167 161 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 C12orf77C9JDV5 145 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 SPINT2O43291 252 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 PDCD6O75340 191 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 SNRNP70P08621 437 aaKnown RBP12.47□□□□□ -0.41
ITGB1-204ENST00000417122 IGHV3-43DP0DP04 118 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 MAP2K4P45985 399 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 RPS25P62851 125 aaKnown RBP12.47□□□□□ -0.41
ITGB1-204ENST00000417122 DEFA6Q01524 100 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 MLLT11Q13015 90 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-204ENST00000417122 TRAM1Q15629 374 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 OR10K2Q6IF99 312 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 OR8H3Q8N146 312 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 DRAM1Q8N682 238 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 RAB9BQ9NP90 201 aa12.47□□□□□ -0.41
ITGB1-204ENST00000417122 M0QZK8 103 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 HSD17B6O14756 317 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 KCNAB3O43448 404 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 AMY1AP04745 511 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 AMY2AP04746 511 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 LPLP06858 475 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 CD37P11049 281 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 CPEP16870 476 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 PSMA1P25786 263 aaKnown RBP12.46□□□□□ -0.41
ITGB1-204ENST00000417122 HTR2CP28335 458 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 ZNF816Q0VGE8 651 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-204ENST00000417122 HES1Q14469 280 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 Q3ZCU0 254 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 NKAPLQ5M9Q1 402 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 FAM53AQ6NSI3 398 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-204ENST00000417122 TRAT1Q6PIZ9 186 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 TMEM91Q6ZNR0 172 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 LYG1Q8N1E2 194 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 PRR18Q8N4B5 295 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 C8orf31Q8N9H6 132 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 KCNG3Q8TAE7 436 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 CYYR1Q96J86 154 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 MGLLQ99685 303 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 RAB26Q9ULW5 256 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 MOB4Q9Y3A3 225 aa12.46□□□□□ -0.41
ITGB1-204ENST00000417122 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-204ENST00000417122 CCRL2O00421 344 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 SLC22A1O15245 554 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 ATP6V1G2O95670 118 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 HBZP02008 142 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 GAPDHP04406 335 aaKnown RBP12.45□□□□□ -0.42
ITGB1-204ENST00000417122 TMEM11P17152 192 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 RCC1P18754 421 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-204ENST00000417122 IL3RAP26951 378 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 RPS27AP62979 156 aaKnown RBP12.45□□□□□ -0.42
ITGB1-204ENST00000417122 TMEM30BQ3MIR4 351 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 C9orf152Q5JTZ5 239 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 NDUFA11Q86Y39 141 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 OR6M1Q8NGM8 313 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 OR1L1Q8NH94 360 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 NEDD4LQ96PU5 975 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-204ENST00000417122 TMEM59Q9BXS4 323 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 KCNK15Q9H427 330 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 MBNL3Q9NUK0 354 aaKnown RBP12.45□□□□□ -0.42
ITGB1-204ENST00000417122 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 BLOC1S6Q9UL45 172 aa12.45□□□□□ -0.42
ITGB1-204ENST00000417122 IGHV1-3A0A0C4DH29 117 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 ARL6IP5O75915 188 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 BPNT1O95861 308 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 IGKV1D-33P01593 117 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 IGKV1-33P01594 117 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 CHATP28329 748 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 REG1BP48304 166 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 EMX1Q04741 257 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-204ENST00000417122 UNC119Q13432 240 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 TBCEQ15813 527 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-204ENST00000417122 CENPVQ7Z7K6 275 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-204ENST00000417122 MOB3BQ86TA1 216 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 OR5AU1Q8NGC0 362 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 OR10V1Q8NGI7 309 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 MRPL30Q8TCC3 161 aaKnown RBP12.44□□□□□ -0.42
ITGB1-204ENST00000417122 SULT4A1Q9BR01 284 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 TM2D1Q9BX74 207 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 TAF9BQ9HBM6 251 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 KCNIP1Q9NZI2 227 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 WNK1Q9H4A3 2382 aa12.44□□□□□ -0.42
ITGB1-204ENST00000417122 TMEM14DPA8MWL7 114 aa12.43□□□□□ -0.42
ITGB1-204ENST00000417122 SLC31A2O15432 143 aa12.43□□□□□ -0.42
ITGB1-204ENST00000417122 OPN1MWP04001 364 aa12.43□□□□□ -0.42
ITGB1-204ENST00000417122 OPN1MW2P0DN77 364 aa12.43□□□□□ -0.42
ITGB1-204ENST00000417122 OPN1MW3P0DN78 364 aa12.43□□□□□ -0.42
ITGB1-204ENST00000417122 QRFPP83859 136 aa12.43□□□□□ -0.42
ITGB1-204ENST00000417122 HNF4GQ14541 408 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms