RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 FBLL1A6NHQ2 334 aaKnown RBP12.17□□□□□ -0.46
DUSP28-202ENST00000405954 HRKO00198 91 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 SH2D1BO14796 132 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 OR7C1O76099 320 aaPredicted RBP12.17□□□□□ -0.46
DUSP28-202ENST00000405954 SEC13P55735 322 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 BAXQ07812 192 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 OR2V1Q8NHB1 315 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 SGCZQ96LD1 299 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 GAGE12BA1L429 117 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 H3BML4 177 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 NDUFB8O95169 186 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 NUDT3O95989 172 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 FBLP22087 321 aaKnown RBP12.17□□□□□ -0.46
DUSP28-202ENST00000405954 COMPP49747 757 aaPredicted RBP12.17□□□□□ -0.46
DUSP28-202ENST00000405954 MLF2Q15773 248 aaPredicted RBP12.17□□□□□ -0.46
DUSP28-202ENST00000405954 VN1R4Q7Z5H5 301 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 FAM19A2Q8N3H0 131 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 BCORP1Q8N888 145 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 SLC45A2Q9UMX9 530 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 LOC105371242A0A075B767 164 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 SHISA7A6NL88 538 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 HSPB6O14558 160 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 NPIPB7O75200 414 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 FOXK1P85037 733 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 PRICKLE4Q2TBC4 344 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 FDX2Q6P4F2 183 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 TMEM52Q8NDY8 209 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 WDR61Q9GZS3 305 aaKnown RBP12.16□□□□□ -0.46
DUSP28-202ENST00000405954 BRWD1Q9NSI6 2320 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 CLCF1Q9UBD9 225 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 IGKV1D-42A0A075B6H8 117 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 TRAV36DV7A0A075B6V5 113 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 A0A1W2PPV4 95 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 H0YGG7 62 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 J3QW42 95 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 CLDN1O95832 211 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 CLRN1P58418 232 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 LINC00615Q96LM1 132 aaPredicted RBP12.16□□□□□ -0.46
DUSP28-202ENST00000405954 GPX7Q96SL4 187 aaPredicted RBP12.16□□□□□ -0.46
DUSP28-202ENST00000405954 RTN4RQ9BZR6 473 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 C11orf94C9JXX5 98 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 VAMP5O95183 116 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 HLA-DOBP13765 273 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 RELBQ01201 579 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 ROM1Q03395 351 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 CD226Q15762 336 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 RAB30Q15771 203 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 GABRA6Q16445 453 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 PRTGQ2VWP7 1150 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 TEX43Q6ZNM6 134 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 C1orf174Q8IYL3 243 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 TXNIPQ9H3M7 391 aa12.16□□□□□ -0.46
DUSP28-202ENST00000405954 FREM2Q5SZK8 3169 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 PGPEP1LA6NFU8 196 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 ZNF732B4DXR9 585 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 PROB1E7EW31 1015 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 BGLAPP02818 100 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 FAHP16930 419 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 MPLP40238 635 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 SMAGPQ0VAQ4 97 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 HIST3H3Q16695 136 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 LINC01551Q86U37 167 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 OR2Y1Q8NGV0 311 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 LMX1AQ8TE12 382 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 VWCEQ96DN2 955 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 NRN1Q9NPD7 142 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 PRTFDC1Q9NRG1 225 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 TMEM74BQ9NUR3 256 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 PSENENQ9NZ42 101 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 A0A1B0GV72 72 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 TSPOP30536 169 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 ZNF121P58317 390 aaPredicted RBP12.15□□□□□ -0.46
DUSP28-202ENST00000405954 WDFY1Q8IWB7 410 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 G6PC2Q9NQR9 355 aa12.15□□□□□ -0.46
DUSP28-202ENST00000405954 K7EQS6 105 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 PPBPP02775 128 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 CEBPBP17676 345 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 EFNA3P52797 238 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 SCGB2A2Q13296 93 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 IZUMO4Q1ZYL8 232 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 SMIM21Q3B7S5 101 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 ZFYVE21Q9BQ24 234 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 MBNL1Q9NR56 388 aaKnown RBP12.14□□□□□ -0.47
DUSP28-202ENST00000405954 IGHV2-70DA0A0C4DH43 119 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 NPIPA3F8WFD2 350 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 SPRY1O43609 319 aaPredicted RBP12.14□□□□□ -0.47
DUSP28-202ENST00000405954 IGLC2P0DOY2 106 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 IGLC3P0DOY3 106 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 OTX1P32242 354 aaPredicted RBP12.14□□□□□ -0.47
DUSP28-202ENST00000405954 UBE2NP61088 152 aaKnown RBP12.14□□□□□ -0.47
DUSP28-202ENST00000405954 PLPPR5Q32ZL2 321 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 OR5D13Q8NGL4 314 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 C16orf52Q8NHV5 167 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 C1QTNF9BB2RNN3 333 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 MPPED1O15442 326 aa12.14□□□□□ -0.47
DUSP28-202ENST00000405954 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
DUSP28-202ENST00000405954 NDUFB4O95168 129 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms