RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 DGCR2P98153 550 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 ZNF846Q147U1 533 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 TMEM30BQ3MIR4 351 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 METTL11BQ5VVY1 283 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 OR52W1Q6IF63 320 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 LYSMD2Q8IV50 215 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 Q8N402 240 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 Q8N7P7 452 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 OR4A4PQ8NGN8 299 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 RFESDQ8TAC1 157 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 MAFIPQ8WZ33 124 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 GALMQ96C23 342 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 WDR12Q9GZL7 423 aaKnown RBP10.11□□□□□ -0.79
LINC00339-201ENST00000404210 SIRPDQ9H106 197 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 UNKLQ9H9P5 680 aaKnown RBP10.11□□□□□ -0.79
LINC00339-201ENST00000404210 TAS2R8Q9NYW2 309 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 ONECUT1Q9UBC0 465 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 ZNF107Q9UII5 783 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-201ENST00000404210 ANXA10Q9UJ72 324 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 RBMX2Q9Y388 322 aaKnown RBP10.11□□□□□ -0.79
LINC00339-201ENST00000404210 CCDC168Q8NDH2 2452 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 IGKV1D-8A0A087WSZ0 117 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 FABP7O15540 132 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 MMP23AO75900 390 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 TOX4O94842 621 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 IGHV1-8P0DP01 117 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 MMP9P14780 707 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 FPR2P25090 351 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 SSTR5P35346 364 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 ERVFRD-1P60508 538 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 FAHD2BQ6P2I3 314 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-201ENST00000404210 C5orf24Q7Z6I8 188 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 TMEM229BQ8NBD8 167 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 OR1L1Q8NH94 360 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 FAHD2AQ96GK7 314 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 SDHCQ99643 169 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-201ENST00000404210 METTL8Q9H825 291 aaKnown RBP10.1□□□□□ -0.79
LINC00339-201ENST00000404210 AUP1Q9Y679 476 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 SESN1Q9Y6P5 492 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 VPS13CQ709C8 3753 aa10.1□□□□□ -0.79
LINC00339-201ENST00000404210 ABCA2Q9BZC7 2435 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 NOTCH2Q04721 2471 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 ZNF16P17020 682 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-201ENST00000404210 OMGP23515 440 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 GDNFP39905 211 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 LOXL3P58215 753 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 Q3ZCU0 254 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 CHRFAM7AQ494W8 412 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 RNASE12Q5GAN4 147 aaKnown RBP10.09□□□□□ -0.79
LINC00339-201ENST00000404210 LY6G6FQ5SQ64 297 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 STEAP3Q658P3 488 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 PRR18Q8N4B5 295 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 OR5AP2Q8NGF4 316 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 SNAPC3Q92966 411 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 KIRREL1Q96J84 757 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 TSC22D3Q99576 134 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 CABLES2Q9BTV7 478 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 CCDC32Q9BV29 185 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 TMPRSS13Q9BYE2 586 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 TOLLIPQ9H0E2 274 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 C7orf69Q9H7B7 122 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 HEXA-AS1Q9H8Q6 139 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 OR2S2Q9NQN1 319 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 WNK2Q9Y3S1 2297 aa10.09□□□□□ -0.79
LINC00339-201ENST00000404210 MYO9AB2RTY4 2548 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 A0A087X0M5 115 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 TRBV6-7A0A0A0MS04 114 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 IGKV1-6A0A0C4DH72 117 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 A0A1B0GX30 115 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 SDCBPO00560 298 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-201ENST00000404210 LANCL1O43813 399 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 YPEL1O60688 119 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 CSF1P09603 554 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 ZBTB25P24278 435 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 CD34P28906 385 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 OR3A3P47888 321 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 TAS2R46P59540 309 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 TAS2R19P59542 299 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 ARPC4P59998 168 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 KRTAP1-1Q07627 177 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 BAK1Q16611 211 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 MORN2Q502X0 79 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 IGSF11Q5DX21 431 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 PRAMEF5Q5TYX0 476 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 VMO1Q7Z5L0 202 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 OR13D1Q8NGV5 346 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 UBALD1Q8TB05 177 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 TNFRSF14Q92956 283 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 UPRTQ96BW1 309 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 YPEL2Q96QA6 119 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 TBX15Q96SF7 602 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 TMEM133Q9H2Q1 129 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 NECAP2Q9NVZ3 263 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 GFOD1Q9NXC2 390 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 JPT1Q9UK76 154 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 KCNS2Q9ULS6 477 aa10.08□□□□□ -0.8
LINC00339-201ENST00000404210 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC00339-201ENST00000404210 ABCA1O95477 2261 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms