RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 MS4A6AQ9H2W1 248 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 MRPS18CQ9Y3D5 142 aaKnown RBP8.72□□□□□ -1.01
PTPRM-203ENST00000400060 DOCK1Q14185 1865 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 MYO10Q9HD67 2058 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.72□□□□□ -1.01
PTPRM-203ENST00000400060 C4orf47A7E2U8 309 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 SMIM13P0DJ93 91 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 HOXC12P31275 282 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 TMEM156Q8N614 296 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 TMEM186Q96B77 213 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 ZNF831Q5JPB2 1677 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 VAMP5O95183 116 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 CT45A6P0DMU7 189 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 CT45A5P0DMU8 189 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 CT45A7P0DMV0 189 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 TFPI2P48307 235 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 SOX8P57073 446 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 CT45A1Q5HYN5 189 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 CT45A3Q8NHU0 189 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 SPACA5Q96QH8 159 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 SH2D2AQ9NP31 389 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 NRN1Q9NPD7 142 aa8.72□□□□□ -1.01
PTPRM-203ENST00000400060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.71□□□□□ -1.01
PTPRM-203ENST00000400060 M0R296 226 aa8.71□□□□□ -1.01
PTPRM-203ENST00000400060 BCL3P20749 454 aa8.71□□□□□ -1.01
PTPRM-203ENST00000400060 RIPPLY3P57055 190 aa8.71□□□□□ -1.01
PTPRM-203ENST00000400060 PRICKLE4Q2TBC4 344 aa8.71□□□□□ -1.01
PTPRM-203ENST00000400060 Q6ZNB5 142 aa8.71□□□□□ -1.01
PTPRM-203ENST00000400060 C6orf201Q7Z4U5 140 aa8.71□□□□□ -1.01
PTPRM-203ENST00000400060 PLPPR1Q8TBJ4 325 aa8.71□□□□□ -1.01
PTPRM-203ENST00000400060 ABHD3Q8WU67 409 aa8.71□□□□□ -1.01
PTPRM-203ENST00000400060 OR5B21A6NL26 309 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 M0R135 149 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 SMPD2O60906 423 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 SUB1P53999 127 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPRM-203ENST00000400060 RPS15P62841 145 aaKnown RBP8.71□□□□□ -1.02
PTPRM-203ENST00000400060 LRTM2Q8N967 370 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 ZBTB34Q8NCN2 500 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 BLNKQ8WV28 456 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 TAF15Q92804 592 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPRM-203ENST00000400060 ZNF799Q96GE5 643 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 UBR3Q6ZT12 1888 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 BMPR1BO00238 502 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 GNG7O60262 68 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 GLI4P10075 376 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 EPHA8P29322 1005 aaPredicted RBP8.71□□□□□ -1.02
PTPRM-203ENST00000400060 UCP2P55851 309 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 RUNX1Q01196 453 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 HHEXQ03014 270 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 LIPHQ8WWY8 451 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 FGF11Q92914 225 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 GFI1Q99684 422 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 CSTL1Q9H114 145 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 ELOVL5Q9NYP7 299 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 OR2W5A6NFC9 320 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 RPL13AP40429 203 aaKnown RBP8.71□□□□□ -1.02
PTPRM-203ENST00000400060 TMEM215Q68D42 235 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 OR10V1Q8NGI7 309 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 TMEM45BQ96B21 275 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 GNB1LQ9BYB4 327 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 HS3ST3B1Q9Y662 390 aa8.71□□□□□ -1.02
PTPRM-203ENST00000400060 HELTA6NFD8 242 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 CD5LO43866 347 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 SERF1AO75920 110 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 IGFBP3P17936 291 aaPredicted RBP8.7□□□□□ -1.02
PTPRM-203ENST00000400060 PLAC9Q5JTB6 97 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 LINC01590Q5TEZ4 76 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 LINC00596Q86U02 117 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 OXGR1Q96P68 337 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 MENTQ9BUN1 341 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 TMEM38BQ9NVV0 291 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 TECRQ9NZ01 308 aaKnown RBP8.7□□□□□ -1.02
PTPRM-203ENST00000400060 SPCS1Q9Y6A9 102 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 TANC1Q9C0D5 1861 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 DNPH1O43598 174 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 GDF9O60383 454 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 C1orf61Q13536 156 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 METTL27Q8N6F8 245 aaPredicted RBP8.7□□□□□ -1.02
PTPRM-203ENST00000400060 ABHD5Q8WTS1 349 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 LEPROTL1O95214 131 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 TYMSP04818 313 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 CLDN18P56856 261 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 PRTGQ2VWP7 1150 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 LRRC10Q5BKY1 277 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 ZNF324BQ6AW86 544 aaPredicted RBP8.7□□□□□ -1.02
PTPRM-203ENST00000400060 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 OR2M7Q8NG81 312 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 LSM10Q969L4 123 aaKnown RBP8.7□□□□□ -1.02
PTPRM-203ENST00000400060 GRAMD2BQ96HH9 432 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 CCL26Q9Y258 94 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 PATJQ8NI35 1801 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 RALGAPA2Q2PPJ7 1873 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 PCM1Q15154 2024 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 H3BML4 177 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 P2RY2P41231 377 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 INSM1Q01101 510 aaPredicted RBP8.7□□□□□ -1.02
PTPRM-203ENST00000400060 TEX43Q6ZNM6 134 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 OR4X2Q8NGF9 303 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 OR51G1Q8NGK1 321 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 OR1L3Q8NH93 324 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms