RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ANXA10Q9UJ72 324 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 SDCBPO00560 298 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 OR7C1O76099 320 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 ATG12O94817 140 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 CD55P08174 381 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 GATA4P43694 442 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 CCL8P80075 99 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 SWI5Q1ZZU3 235 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 OR10C1Q96KK4 312 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 SLC5A7Q9GZV3 580 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 MS4A5Q9H3V2 200 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 MMP26Q9NRE1 261 aa16.26■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A10PA6NDY2 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A18PA6NE21 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A16PA6NEW6 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A20PA6NIJ5 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A8PA6NJQ4 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A7PA6NKC0 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A22PA8MWA6 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A12PA8MX19 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A5PA8MXJ8 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A23PA8MXZ1 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 PRSS44E7EML9 344 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 DNASE2O00115 360 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 TOR1AO14656 332 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A15PP0C7V4 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A13PP0C7W8 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A14PP0C7W9 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM90A24PP0C7X0 464 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 DUSP1P28562 367 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 PMELP40967 661 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 C10orf91Q5T1B1 145 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 DHRS11Q6UWP2 260 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 C6orf201Q7Z4U5 140 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 LRRC29Q8WV35 223 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 CYYR1Q96J86 154 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 AIFM2Q9BRQ8 373 aa16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 NKX6-2Q9C056 277 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 ZNF701Q9NV72 531 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-204ENST00000397760 CRYM-AS1A6NIL9 109 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 TPD52L2O43399 206 aaKnown RBP16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 FAM157CP0CG43 387 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 PI3P19957 117 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 CHATP28329 748 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 RAB32Q13637 225 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 IL13RA2Q14627 380 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 LINC00596Q86U02 117 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 SVBPQ8N300 66 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 OR10Z1Q8NGY1 313 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 HES4Q9HCC6 221 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 GCM1Q9NP62 436 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 NECAP2Q9NVZ3 263 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 OR5AC2Q9NZP5 309 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 A6NNC1 897 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 WNT9BO14905 357 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 PDCD6O75340 191 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 IFNA21P01568 189 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 TNFRSF1AP19438 455 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 FUT3P21217 361 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 CFHR2P36980 270 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 HOXA4Q00056 320 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 DEFA5Q01523 94 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 MPV17LQ2QL34 196 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 ERGIC1Q969X5 290 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 ZNF2Q9BSG1 426 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 LPAR3Q9UBY5 353 aa16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 CARHSP1Q9Y2V2 147 aaKnown RBP16.24■□□□□ 0.19
PDLIM2-204ENST00000397760 ICE1Q9Y2F5 2266 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 ROS1P08922 2347 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 HS3ST1O14792 307 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 GAPDHP04406 335 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 RBM39Q14498 530 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 TESK1Q15569 626 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 BRICD5Q6PL45 260 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 ATRAIDQ6UW56 229 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 CLRN3Q8NCR9 226 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 FAAP24Q9BTP7 215 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 EGLN1Q9GZT9 426 aa16.23■□□□□ 0.19
PDLIM2-204ENST00000397760 A0A1W2PPR1 153 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 MSGN1A6NI15 193 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 FIP1L1Q6UN15 594 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 ACP7Q6ZNF0 438 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 GALNT14Q96FL9 552 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 NARS2Q96I59 477 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 SMIM8Q96KF7 97 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 SAP30LQ9HAJ7 183 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 ZFP57Q9NU63 452 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 PPP1R3CQ9UQK1 317 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 KCNIP3Q9Y2W7 256 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 KNG1P01042 644 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 OR5H8P0DN80 308 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 SMCO1Q147U7 214 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 ZNF146Q15072 292 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 GCSAMQ8N6F7 178 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 LRTM2Q8N967 370 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 TMED6Q8WW62 240 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 SPOCK3Q9BQ16 436 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 CMSS1Q9BQ75 279 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 SULT4A1Q9BR01 284 aa16.22■□□□□ 0.19
PDLIM2-204ENST00000397760 TREM2Q9NZC2 230 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms