RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PECRQ9BY49 303 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 IFT22Q9H7X7 185 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 SCPEP1Q9HB40 452 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 PALMDQ9NP74 551 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.43□□□□□ -1.06
NEDD8-202ENST00000396828 ZNRD1Q9P1U0 126 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 NLKQ9UBE8 527 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 IL36RNQ9UBH0 155 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 OR14J1Q9UGF5 321 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 KPTNQ9Y664 436 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 TMEM235A6NFC5 223 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 OR2AT4A6NND4 320 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 FOXI3A8MTJ6 420 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-202ENST00000396828 MFNGO00587 321 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 GSTZ1O43708 216 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-202ENST00000396828 UPK1BO75841 260 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 RBBP9O75884 186 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 OR2H2O95918 312 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 HAND1O96004 215 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 GLAP06280 429 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 LPLP06858 475 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 CD3GP09693 182 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 CHATP28329 748 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 DUSP1P28562 367 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 TMEM50BP56557 158 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 HACD4Q5VWC8 232 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 STUMQ69YW2 141 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 C6orf201Q7Z4U5 140 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 SUMF2Q8NBJ7 301 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 FAM110DQ8TAY7 271 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-202ENST00000396828 GAFA1Q96PS6 74 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 DCTN5Q9BTE1 182 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 FAAP24Q9BTP7 215 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 C16orf95Q9H693 158 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 SEBOXQ9HB31 216 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-202ENST00000396828 ABCB10Q9NRK6 738 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 TAS2R8Q9NYW2 309 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 SIGLEC9Q9Y336 463 aa8.42□□□□□ -1.06
NEDD8-202ENST00000396828 RFPL4AA6NLU0 287 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 RFPL4AL1F8VTS6 287 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 SIRPB1O00241 398 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 TIMM23O14925 209 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 NPFFO15130 113 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 CA11O75493 328 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 GSTT2BP0CG30 244 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 IL7P13232 177 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 PRDX2P32119 198 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 CBX5P45973 191 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 GABRA2P47869 451 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 ACTBP60709 375 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 RPL15P61313 204 aaKnown RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 DGCR2P98153 550 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 SSBP1Q04837 148 aaKnown RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 PAN3Q58A45 887 aaKnown RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 RNASE12Q5GAN4 147 aaKnown RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 ATPAF1Q5TC12 328 aaPredicted RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 SIGIRRQ6IA17 410 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 SLC35E4Q6ICL7 350 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 HCP5Q6MZN7 132 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 Q6P435 159 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 ZNF788Q6ZQV5 615 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 TRAPPC6BQ86SZ2 158 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 ANGPTL6Q8NI99 470 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 PPP1R35Q8TAP8 253 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 H1FXQ92522 213 aaKnown RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 AJUBAQ96IF1 538 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 SDHCQ99643 169 aaPredicted RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 DPCDQ9BVM2 203 aaPredicted RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 IFT46Q9NQC8 304 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 RCC2Q9P258 522 aaKnown RBP8.41□□□□□ -1.06
NEDD8-202ENST00000396828 VPREB3Q9UKI3 123 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 FAM96BQ9Y3D0 163 aa8.41□□□□□ -1.06
NEDD8-202ENST00000396828 TRAV24A0A0B4J272 114 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 UBE2QL1A1L167 161 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 MEIOCA2RUB1 952 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 NKX6-3A6NJ46 265 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 SLC33A1O00400 549 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-202ENST00000396828 HSPB6O14558 160 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 NDUFB3O43676 98 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 TSPAN9O75954 239 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 FBP1P09467 338 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 CSF1P09603 554 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 PSG2P11465 335 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 PTHLHP12272 177 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 LMO1P25800 156 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 SAA4P35542 130 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 KCNJ3P48549 501 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 DEFA1P59665 94 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 DEFA3P59666 94 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 AP3S2P59780 193 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 ERVFRD-1P60508 538 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 COL10A1Q03692 680 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 BAK1Q16611 211 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 C11orf91Q3C1V1 193 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 ZNF57Q68EA5 555 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-202ENST00000396828 DHRS7BQ6IAN0 325 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-202ENST00000396828 SLC36A1Q7Z2H8 476 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 TOMM5Q8N4H5 51 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 ZNF561Q8N587 486 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 ASCC1Q8N9N2 400 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms