RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 DUSP21Q9H596 190 aa15.45■□□□□ 0.06
UPK3B-203ENST00000394849 TRBV5-5A0A0J9YX44 114 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 LY86O95711 162 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 IGKV1D-33P01593 117 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 IGKV1-33P01594 117 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 TMEM225BP0DP42 221 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 CRHBPP24387 322 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 SNU13P55769 128 aaKnown RBP15.44■□□□□ 0.06
UPK3B-203ENST00000394849 FHL3Q13643 280 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 EBI3Q14213 229 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 SPHARQ15513 63 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 C17orf58Q2M2W7 97 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 RBM48Q5RL73 367 aaKnown RBP15.44■□□□□ 0.06
UPK3B-203ENST00000394849 FAM27D1Q5T7N8 215 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 SBSPONQ8IVN8 264 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 ABCG5Q9H222 651 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 NCOR1P1Q9H4R4 102 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 LIN7CQ9NUP9 197 aaKnown RBP15.44■□□□□ 0.06
UPK3B-203ENST00000394849 CKLFQ9UBR5 152 aa15.44■□□□□ 0.06
UPK3B-203ENST00000394849 CD1AP06126 327 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 ZNF44P15621 663 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 GPR12P47775 334 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 SAXO1Q8IYX7 474 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 OR14A2Q96R54 314 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 CITED4Q96RK1 184 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 FAM192AQ9GZU8 254 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 LINC00574Q9H8X3 128 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 TMEM138Q9NPI0 162 aa15.43■□□□□ 0.06
UPK3B-203ENST00000394849 HUWE1Q7Z6Z7 4374 aaKnown RBP15.43■□□□□ 0.06
UPK3B-203ENST00000394849 KDM4BO94953 1096 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 CGB3P0DN86 165 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 CGB7P0DN87 165 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 CALCBP10092 127 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 BDKRB2P30411 391 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 RPS11P62280 158 aaKnown RBP eCLIP15.42■□□□□ 0.06
UPK3B-203ENST00000394849 IRF3Q14653 427 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 DDI2Q5TDH0 399 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 ZNF529Q6P280 563 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 OR10A7Q8NGE5 316 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 TNFAIP8L1Q8WVP5 186 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 THRSPQ92748 146 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 ORAI1Q96D31 301 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 COQ2Q96H96 371 aa15.42■□□□□ 0.06
UPK3B-203ENST00000394849 LYSTQ99698 3801 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 IGKV1-12A0A0C4DH73 117 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 A0A1W2PPK0 400 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 NCBP2LA6PVI3 153 aaKnown RBP15.41■□□□□ 0.06
UPK3B-203ENST00000394849 IGKV1D-12P01611 117 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 IGHG4P01861 327 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 OR8U8P0C7N1 319 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 HSMCR30P0CW71 290 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 MAPK3P27361 379 aaPredicted RBP15.41■□□□□ 0.06
UPK3B-203ENST00000394849 ZP1P60852 638 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 SCN1BQ07699 218 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 PRSS48Q7RTY5 328 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 ZNF429Q86V71 674 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 OR10X1Q8NGY0 326 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 UFD1Q92890 307 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 PSG11Q9UQ72 335 aa15.41■□□□□ 0.06
UPK3B-203ENST00000394849 LSM2Q9Y333 95 aaKnown RBP15.41■□□□□ 0.06
UPK3B-203ENST00000394849 LINC01548A6NM66 108 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 SLC33A1O00400 549 aaPredicted RBP15.4■□□□□ 0.06
UPK3B-203ENST00000394849 GABRPO00591 440 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 DEGS1O15121 323 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 ZNF93P35789 620 aaPredicted RBP15.4■□□□□ 0.06
UPK3B-203ENST00000394849 ZNF816Q0VGE8 651 aaPredicted RBP15.4■□□□□ 0.06
UPK3B-203ENST00000394849 IZUMO1Q8IYV9 350 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 MS4A15Q8N5U1 240 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 OR11H1Q8NG94 326 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 OR51T1Q8NGJ9 327 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 OR2T10Q8NGZ9 312 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 CHCHD6Q9BRQ6 235 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 TMED9Q9BVK6 235 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 CALYQ9NYX4 217 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 IDI2-AS1Q9NZ38 188 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 ZNF580Q9UK33 172 aa15.4■□□□□ 0.06
UPK3B-203ENST00000394849 DNAH1Q9P2D7 4330 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 TRBV5-7A0A0A0MS05 114 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 IL1AP01583 271 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 GAPDHP04406 335 aaKnown RBP15.39■□□□□ 0.05
UPK3B-203ENST00000394849 OR5H8P0DN80 308 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 IGFBP3P17936 291 aaPredicted RBP15.39■□□□□ 0.05
UPK3B-203ENST00000394849 FSTP19883 344 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 VDAC1P21796 283 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 ATXN7L3Q14CW9 347 aaPredicted RBP15.39■□□□□ 0.05
UPK3B-203ENST00000394849 UTF1Q5T230 341 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 Q6P435 159 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 PXT1Q8NFP0 134 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 OR8H1Q8NGG4 311 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 EAF1Q96JC9 268 aaPredicted RBP15.39■□□□□ 0.05
UPK3B-203ENST00000394849 DERL3Q96Q80 235 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 S100A13Q99584 98 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 BARHL1Q9BZE3 327 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 ING3Q9NXR8 418 aa15.39■□□□□ 0.05
UPK3B-203ENST00000394849 TRAV8-7A0A075B6U6 113 aa15.38■□□□□ 0.05
UPK3B-203ENST00000394849 HSD17B6O14756 317 aa15.38■□□□□ 0.05
UPK3B-203ENST00000394849 DENRO43583 198 aaKnown RBP15.38■□□□□ 0.05
UPK3B-203ENST00000394849 GPX5O75715 221 aa15.38■□□□□ 0.05
UPK3B-203ENST00000394849 FRMD6-AS1P0C7T7 363 aa15.38■□□□□ 0.05
UPK3B-203ENST00000394849 GLP1RP43220 463 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms