RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
RPAIN-202ENST00000381208 GON7Q9BXV9 100 aa10.3□□□□□ -0.76
RPAIN-202ENST00000381208 PGPEP1Q9NXJ5 209 aa10.3□□□□□ -0.76
RPAIN-202ENST00000381208 FAM90A10PA6NDY2 464 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 EFCAB10A6NFE3 127 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 FAM90A7PA6NKC0 464 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 SERPINE3A8MV23 424 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 FAM90A23PA8MXZ1 464 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 MCRIP1C9JLW8 97 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 SDCBPO00560 298 aaPredicted RBP10.29□□□□□ -0.76
RPAIN-202ENST00000381208 IGKV1D-33P01593 117 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 IGKV1-33P01594 117 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 IGHG2P01859 326 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 GLAP06280 429 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 DCTN2Q13561 401 aaKnown RBP10.29□□□□□ -0.76
RPAIN-202ENST00000381208 SLC22A6Q4U2R8 563 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 ATAD3CQ5T2N8 411 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 STEAP3Q658P3 488 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 SLC35E3Q7Z769 313 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 TGIF2LXQ8IUE1 241 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 DHRSXQ8N5I4 330 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 OR8H1Q8NGG4 311 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 OR2T10Q8NGZ9 312 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 LEAP2Q969E1 77 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 KRTAP9-2Q9BYQ4 174 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 GFOD1Q9NXC2 390 aa10.29□□□□□ -0.76
RPAIN-202ENST00000381208 IGHV1-3A0A0C4DH29 117 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
RPAIN-202ENST00000381208 C15orf65H3BRN8 121 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 AIPO00170 330 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 AP4M1O00189 453 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 SPINT2O43291 252 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 IGHV3-7P01780 117 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 MT-ND4P03905 459 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 CD1AP06126 327 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 CD1BP29016 333 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 GP2P55259 537 aaKnown RBP10.28□□□□□ -0.76
RPAIN-202ENST00000381208 RPL23AP62750 156 aaKnown RBP10.28□□□□□ -0.76
RPAIN-202ENST00000381208 UTF1Q5T230 341 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 C6orf183Q5T699 404 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 ZNF497Q6ZNH5 498 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 MOB3BQ86TA1 216 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 LIN7CQ9NUP9 197 aaKnown RBP10.28□□□□□ -0.76
RPAIN-202ENST00000381208 CNOT2Q9NZN8 540 aaKnown RBP10.28□□□□□ -0.76
RPAIN-202ENST00000381208 RCC2Q9P258 522 aaKnown RBP10.28□□□□□ -0.76
RPAIN-202ENST00000381208 DNAH3Q8TD57 4116 aa10.28□□□□□ -0.76
RPAIN-202ENST00000381208 MAPK3P27361 379 aaPredicted RBP10.27□□□□□ -0.76
RPAIN-202ENST00000381208 CAPGP40121 348 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 MYCNOSP40205 109 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 HNF4GQ14541 408 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 TEX38Q6PEX7 206 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 OR2W3Q7Z3T1 314 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 ZNF554Q86TJ5 538 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 JAGN1Q8N5M9 183 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 NKAIN3Q8N8D7 197 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 GHRLQ9UBU3 117 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 CLEC2DQ9UHP7 191 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 TRAPPC2LQ9UL33 140 aa10.27□□□□□ -0.76
RPAIN-202ENST00000381208 MRPS28Q9Y2Q9 187 aaKnown RBP10.27□□□□□ -0.76
RPAIN-202ENST00000381208 SIRT4Q9Y6E7 314 aaPredicted RBP10.27□□□□□ -0.76
RPAIN-202ENST00000381208 TRBV5-7A0A0A0MS05 114 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
RPAIN-202ENST00000381208 MPIG6BO95866 241 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 ZNF137PP52743 207 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 ST3GAL4Q11206 333 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 DOC2BQ14184 412 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 DIAPH2-AS1Q14236 149 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 AWAT2Q6E213 333 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 C10orf99Q6UWK7 81 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 GLIPR1L1Q6UWM5 242 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 ZNF329Q86UD4 541 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 GAPTQ8N292 157 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 STPG2Q8N412 459 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 ZNF485Q8NCK3 441 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 EAF1Q96JC9 268 aaPredicted RBP10.26□□□□□ -0.77
RPAIN-202ENST00000381208 PGLYRP3Q96LB9 341 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 UQCC2Q9BRT2 126 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 ABCG5Q9H222 651 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 ETAA1Q9NY74 926 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 GNG12Q9UBI6 72 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 TRAV39A0A0B4J263 110 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 NUDT19A8MXV4 375 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 MYL12BO14950 172 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 TNFAIP8O95379 198 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 MOSP00540 346 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 LALBAP00709 142 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 THBS3P49746 956 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 RPS11P62280 158 aaKnown RBP eCLIP10.26□□□□□ -0.77
RPAIN-202ENST00000381208 ADARB1P78563 741 aaKnown RBP10.26□□□□□ -0.77
RPAIN-202ENST00000381208 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 PNLIPRP3Q17RR3 467 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 SYT6Q5T7P8 510 aaPredicted RBP10.26□□□□□ -0.77
RPAIN-202ENST00000381208 RAB12Q6IQ22 244 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 SLC25A48Q6ZT89 311 aaKnown RBP10.26□□□□□ -0.77
RPAIN-202ENST00000381208 MRPL41Q8IXM3 137 aaKnown RBP10.26□□□□□ -0.77
RPAIN-202ENST00000381208 C8orf59Q8N0T1 100 aaPredicted RBP10.26□□□□□ -0.77
RPAIN-202ENST00000381208 Q8N6K4 173 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 OR13C5Q8NGS8 318 aa10.26□□□□□ -0.77
RPAIN-202ENST00000381208 CCDC107Q8WV48 283 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms