RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RGP1Q92546 391 aaPredicted RBP18.2■□□□□ 0.5
C9orf47-202ENST00000375850 DUX3Q96PT4 197 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 AMBNQ9NP70 447 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 PLSCR3Q9NRY6 295 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 FAM53CQ9NYF3 392 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 AASSQ9UDR5 926 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 AIPO00170 330 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 SPINT2O43291 252 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 MT-ND4P03905 459 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 IGF1P05019 195 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 BDKRB2P30411 391 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 SOX6P35712 828 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 ATAD3CQ5T2N8 411 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 TRAT1Q6PIZ9 186 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 C9orf16Q9BUW7 83 aa18.19■□□□□ 0.5
C9orf47-202ENST00000375850 SERPINA2P20848 420 aa18.18■□□□□ 0.5
C9orf47-202ENST00000375850 INSL3P51460 131 aa18.18■□□□□ 0.5
C9orf47-202ENST00000375850 LUMP51884 338 aaPredicted RBP18.18■□□□□ 0.5
C9orf47-202ENST00000375850 GTF2A1P52655 376 aaPredicted RBP18.18■□□□□ 0.5
C9orf47-202ENST00000375850 CFHR3Q02985 330 aa18.18■□□□□ 0.5
C9orf47-202ENST00000375850 C6orf183Q5T699 404 aa18.18■□□□□ 0.5
C9orf47-202ENST00000375850 TMPRSS11AQ6ZMR5 421 aa18.18■□□□□ 0.5
C9orf47-202ENST00000375850 SLC25A48Q6ZT89 311 aaKnown RBP18.18■□□□□ 0.5
C9orf47-202ENST00000375850 FAM71E2Q8N5Q1 922 aa18.18■□□□□ 0.5
C9orf47-202ENST00000375850 MRPS24Q96EL2 167 aaKnown RBP18.18■□□□□ 0.5
C9orf47-202ENST00000375850 FGF20Q9NP95 211 aaPredicted RBP18.18■□□□□ 0.5
C9orf47-202ENST00000375850 LOC100130705A0A1B0GUX0 176 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 SEC14L6B5MCN3 397 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 H3BNX3 289 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 LIMS3P0CW19 117 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 LIMS4P0CW20 117 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 DCKP27707 260 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 RIPK1Q13546 671 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 FHL3Q13643 280 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 GNG12Q9UBI6 72 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 CKLFQ9UBR5 152 aa18.17■□□□□ 0.5
C9orf47-202ENST00000375850 IRGMA1A4Y4 181 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 MCRIP1C9JLW8 97 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 CA11O75493 328 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 PSMB8P28062 276 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 DEFB136Q30KP8 78 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 ZNF439Q8NDP4 499 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 CCDC107Q8WV48 283 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 ZNF581Q9P0T4 197 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 RCC2Q9P258 522 aaKnown RBP18.16■□□□□ 0.5
C9orf47-202ENST00000375850 TRAPPC2LQ9UL33 140 aa18.16■□□□□ 0.5
C9orf47-202ENST00000375850 GPX5O75715 221 aa18.15■□□□□ 0.5
C9orf47-202ENST00000375850 ECI1P42126 302 aa18.15■□□□□ 0.5
C9orf47-202ENST00000375850 SLC22A6Q4U2R8 563 aa18.15■□□□□ 0.5
C9orf47-202ENST00000375850 SMIM19Q96E16 107 aa18.15■□□□□ 0.5
C9orf47-202ENST00000375850 IGHV3-43A0A0B4J1X8 118 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 C12orf77C9JDV5 145 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 C3orf84H3BNL1 204 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 LANCL1O43813 399 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 IGHV3-43DP0DP04 118 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 ZNF554Q86TJ5 538 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 GAPTQ8N292 157 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 MYOZ3Q8TDC0 251 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 UBE2E2Q96LR5 201 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 KCTD7Q96MP8 289 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 PRR25Q96S07 402 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 ZNF184Q99676 751 aaPredicted RBP18.14■□□□□ 0.49
C9orf47-202ENST00000375850 HSPB9Q9BQS6 159 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 ZNF107Q9UII5 783 aaPredicted RBP18.14■□□□□ 0.49
C9orf47-202ENST00000375850 SCOCQ9UIL1 159 aa18.14■□□□□ 0.49
C9orf47-202ENST00000375850 ZNF256Q9Y2P7 627 aaPredicted RBP18.14■□□□□ 0.49
C9orf47-202ENST00000375850 FAM90A10PA6NDY2 464 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 FAM90A7PA6NKC0 464 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 FAM90A23PA8MXZ1 464 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 OGG1O15527 345 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 GLAP06280 429 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 OR8U8P0C7N1 319 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 IGFBP3P17936 291 aaPredicted RBP18.13■□□□□ 0.49
C9orf47-202ENST00000375850 CHATP28329 748 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 SYT6Q5T7P8 510 aaPredicted RBP18.13■□□□□ 0.49
C9orf47-202ENST00000375850 TMEM65Q6PI78 240 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 CDH26Q8IXH8 852 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 BABAM2Q9NXR7 383 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 ETAA1Q9NY74 926 aa18.13■□□□□ 0.49
C9orf47-202ENST00000375850 ZNF736B4DX44 427 aaPredicted RBP18.12■□□□□ 0.49
C9orf47-202ENST00000375850 VHLP40337 213 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 F2RL1P55085 397 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 RUNX1Q01196 453 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 MED21Q13503 144 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 ZNF260Q3ZCT1 412 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 YIF1BQ5BJH7 314 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 CT45A1Q5HYN5 189 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 XAF1Q6GPH4 301 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 OR11H1Q8NG94 326 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 CT45A3Q8NHU0 189 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 UBALD1Q8TB05 177 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 APH1BQ8WW43 257 aa18.12■□□□□ 0.49
C9orf47-202ENST00000375850 TRBV5-5A0A0J9YX44 114 aa18.11■□□□□ 0.49
C9orf47-202ENST00000375850 SLC31A2O15432 143 aa18.11■□□□□ 0.49
C9orf47-202ENST00000375850 HBZP02008 142 aa18.11■□□□□ 0.49
C9orf47-202ENST00000375850 MYL12AP19105 171 aa18.11■□□□□ 0.49
C9orf47-202ENST00000375850 FSTP19883 344 aa18.11■□□□□ 0.49
C9orf47-202ENST00000375850 LSAMPQ13449 338 aa18.11■□□□□ 0.49
C9orf47-202ENST00000375850 MMDQ15546 238 aa18.11■□□□□ 0.49
C9orf47-202ENST00000375850 Q499Y3 187 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms