RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 IGHMP01871 453 aa18.45■□□□□ 0.54
TGFBR1-202ENST00000374994 PSG5Q15238 335 aa18.45■□□□□ 0.54
TGFBR1-202ENST00000374994 SPINK9Q5DT21 86 aa18.45■□□□□ 0.54
TGFBR1-202ENST00000374994 G6PC2Q9NQR9 355 aa18.45■□□□□ 0.54
TGFBR1-202ENST00000374994 PRSS12P56730 875 aa18.45■□□□□ 0.54
TGFBR1-202ENST00000374994 ZNF784Q8NCA9 323 aaPredicted RBP18.45■□□□□ 0.54
TGFBR1-202ENST00000374994 TRAV34A0A0B4J273 112 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 A0A0B4J293 547 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 HELTA6NFD8 242 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 MOB3BQ86TA1 216 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 OR4P4Q8NGL7 312 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 STARD4Q96DR4 205 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 CCL3P10147 92 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 FGF12P61328 243 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 TUSC5Q8IXB3 177 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 MEF2BQ02080 365 aaPredicted RBP18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 POC1AQ8NBT0 407 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 GOLT1BQ9Y3E0 138 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 CDIPTO14735 213 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 PTPRFP10586 1907 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 CDX1P47902 265 aaPredicted RBP18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 GNG10P50151 68 aa18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 EIF4E3Q8N5X7 224 aaKnown RBP18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 GREB1LQ9C091 1923 aaPredicted RBP18.44■□□□□ 0.54
TGFBR1-202ENST00000374994 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 GABRA6Q16445 453 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 HIST3H3Q16695 136 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 TEPPQ6URK8 271 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 ZNF385AQ96PM9 386 aaKnown RBP18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 SOSTQ9BQB4 213 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 FAM90A26D6RGX4 464 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 DMRT1Q9Y5R6 373 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 OR5AL1P0C617 328 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 KCNAB3O43448 404 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 SRSF10O75494 262 aaKnown RBP18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 RBP4P02753 201 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 IGHV4-34P06331 123 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 CAMPP49913 170 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 RPS11P62280 158 aaKnown RBP eCLIP18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 MS4A3Q96HJ5 214 aa18.43■□□□□ 0.54
TGFBR1-202ENST00000374994 UCP3P55916 312 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 CEACAM21Q3KPI0 293 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 FAM209BQ5JX69 171 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 SLC23A3Q6PIS1 610 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 SCARF2Q96GP6 870 aaPredicted RBP18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 TCFL5Q9UL49 500 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 IGSF23A1L1A6 192 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 RUNX1Q01196 453 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 MT-CO3P00414 261 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 ZNF25P17030 456 aaPredicted RBP18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 TNFAIP6P98066 277 aaPredicted RBP18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 DEFB109BQ30KR1 87 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 DYRK2Q92630 601 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 HIST1H2BAQ96A08 127 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 MISP3Q96FF7 219 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 MKRN2OSH3BPM6 223 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 RECKO95980 971 aa18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 METTL1Q9UBP6 276 aaKnown RBP18.42■□□□□ 0.54
TGFBR1-202ENST00000374994 SNURFLB1AK76 121 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 TRGC2P03986 189 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 FAM157CP0CG43 387 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 HFEQ30201 348 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 CISD1Q9NZ45 108 aaKnown RBP18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 A0A1W2PP11 408 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 ZNF501Q96CX3 271 aaPredicted RBP18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 NPIPB9F8W1W9 429 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 SEMA7AO75326 666 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 ABLIM2Q6H8Q1 611 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 OR8G5Q8NG78 346 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 MPLP40238 635 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 ALKBH6Q3KRA9 238 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 LILRB1Q8NHL6 650 aaPredicted RBP18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 A0A1W2PR80 420 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 G6PCP35575 357 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 TMEM97Q5BJF2 176 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 SGMS2Q8NHU3 365 aa18.41■□□□□ 0.54
TGFBR1-202ENST00000374994 CD99P14209 185 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 NPY1RP25929 384 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 ADIPOR1Q96A54 375 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 RPEQ96AT9 228 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 LYZL6O75951 148 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 ZNF83P51522 516 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 APCDD1LQ8NCL9 501 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 THYN1Q9P016 225 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 DHRS11Q6UWP2 260 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 OR2V2Q96R30 315 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 DOCK5Q9H7D0 1870 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 ISLRO14498 428 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 C1QL1O75973 258 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 THY1P04216 161 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 HIST1H1EP10412 219 aaKnown RBP18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 PRRX1P54821 245 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 C1orf174Q8IYL3 243 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 LHFPL6Q9Y693 200 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 MIA3Q5JRA6 1907 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 MS4A18H0YCH9 400 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 CD1BP29016 333 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 BRS3P32247 399 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 MS4A18Q3C1V0 323 aa18.4■□□□□ 0.54
TGFBR1-202ENST00000374994 INO80CQ6PI98 192 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms