RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 AKAIN1P0CW23 69 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 CCL3L1P16619 93 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 CDK10Q15131 360 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 VAX1Q5SQQ9 334 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-204ENST00000372243 STEAP1BQ6NZ63 245 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 HEPN1Q6WQI6 88 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 C1orf122Q6ZSJ8 110 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 OVCH2Q7RTZ1 564 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 OR52M1Q8NGK5 317 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 OR5H2Q8NGV7 314 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 NECAP2Q9NVZ3 263 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 FLNBO75369 2602 aaKnown RBP13.03□□□□□ -0.32
TMEM53-204ENST00000372243 MAP1AP78559 2803 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-204ENST00000372243 YLPM1P49750 1951 aaKnown RBP13.03□□□□□ -0.32
TMEM53-204ENST00000372243 hCG_1809904A0A1W2PP81 198 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 A0A1W2PR64 198 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 A0A1W2PRV1 198 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 FPR2P25090 351 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 HRH1P35367 487 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 FAUP35544 74 aaKnown RBP13.03□□□□□ -0.32
TMEM53-204ENST00000372243 OR3A3P47888 321 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 IFITM3Q01628 133 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 MEF2DQ14814 521 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 HERPUD1Q15011 391 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 RNASE10Q5GAN6 216 aaKnown RBP13.03□□□□□ -0.32
TMEM53-204ENST00000372243 STEAP3Q658P3 488 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 PRR18Q8N4B5 295 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 C11orf42Q8N5U0 333 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 OR1L1Q8NH94 360 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 KIRREL1Q96J84 757 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 C7orf50Q9BRJ6 194 aaKnown RBP13.03□□□□□ -0.32
TMEM53-204ENST00000372243 IDI2-AS1Q9NZ38 188 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 KPTNQ9Y664 436 aa13.03□□□□□ -0.32
TMEM53-204ENST00000372243 CR1P17927 2039 aa13.02□□□□□ -0.32
TMEM53-204ENST00000372243 CCDC168Q8NDH2 2452 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 TRBV6-7A0A0A0MS04 114 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 TRAV20A0A0B4J274 112 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 IGKV1-6A0A0C4DH72 117 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 RAB3DO95716 219 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 GZMKP49863 264 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 TMEM249Q2WGJ8 235 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 IGSF11Q5DX21 431 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 C16orf87Q6PH81 154 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 BTNL3Q6UXE8 466 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 C5orf24Q7Z6I8 188 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 RFESDQ8TAC1 157 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 COX4I2Q96KJ9 171 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 TOLLIPQ9H0E2 274 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 MMP26Q9NRE1 261 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 JPT1Q9UK76 154 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 ITGB1BP2Q9UKP3 347 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 INSIG2Q9Y5U4 225 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 ABCA2Q9BZC7 2435 aa13.02□□□□□ -0.33
TMEM53-204ENST00000372243 PMP2P02689 132 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 GATA3P23771 443 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 ZBTB25P24278 435 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 RFX2P48378 723 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 LOXL3P58215 753 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 DCTN2Q13561 401 aaKnown RBP13.01□□□□□ -0.33
TMEM53-204ENST00000372243 ARRDC1Q8N5I2 433 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 OR4C16Q8NGL9 310 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 OR10J5Q8NHC4 309 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 IL1F10Q8WWZ1 152 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 UNKLQ9H9P5 680 aaKnown RBP13.01□□□□□ -0.33
TMEM53-204ENST00000372243 HRASLSQ9HDD0 168 aa13.01□□□□□ -0.33
TMEM53-204ENST00000372243 NAP1L6A6NFF2 107 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 CENPXA8MT69 81 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 PLA2G10O15496 165 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 OR5H8P0DN80 308 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 IGHV1-8P0DP01 117 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 OMGP23515 440 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 DVL1P1P54792 670 aaPredicted RBP13□□□□□ -0.33
TMEM53-204ENST00000372243 Q3ZCU0 254 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 DHRS11Q6UWP2 260 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 UBALD1Q8TB05 177 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 TINAGL1Q9GZM7 467 aaPredicted RBP13□□□□□ -0.33
TMEM53-204ENST00000372243 METTL8Q9H825 291 aaKnown RBP13□□□□□ -0.33
TMEM53-204ENST00000372243 LPAR2Q9HBW0 351 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 OR2S2Q9NQN1 319 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 GFOD1Q9NXC2 390 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 EHFQ9NZC4 300 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 ONECUT1Q9UBC0 465 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 ARHGAP32A7KAX9 2087 aa13□□□□□ -0.33
TMEM53-204ENST00000372243 A0A087X0M5 115 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 A0A1B0GX30 115 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 M0QYG6 137 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 SDCBPO00560 298 aaPredicted RBP12.99□□□□□ -0.33
TMEM53-204ENST00000372243 BET1O15155 118 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 YPEL1O60688 119 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 IFNA6P05013 189 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 ARF6P62330 175 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 PAX8Q06710 450 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 ASAH1Q13510 395 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 PRAMEF5Q5TYX0 476 aa12.99□□□□□ -0.33
TMEM53-204ENST00000372243 TMEM17Q86X19 198 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms