RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 PIGYQ3MUY2 71 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 SSMEM1Q8WWF3 244 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 AQP3Q92482 292 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 RSPO3Q9BXY4 272 aaPredicted RBP11.11□□□□□ -0.63
GPC4-201ENST00000370828 TUBD1Q9UJT1 453 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 DEFB108AA8MXU0 73 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
GPC4-201ENST00000370828 NUDT3O95989 172 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 TBC1D28Q2M2D7 210 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 TMEM249Q2WGJ8 235 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 SLC25A34Q6PIV7 304 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 Q8WTZ3 238 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 COLCA2A8K830 154 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 ALG1L2C9J202 215 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 SELLP14151 372 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
GPC4-201ENST00000370828 CISD2Q8N5K1 135 aaKnown RBP11.11□□□□□ -0.63
GPC4-201ENST00000370828 POC1AQ8NBT0 407 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 OR52M1Q8NGK5 317 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 ASB10Q8WXI3 467 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 OR4C12Q96R67 309 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 SLC45A2Q9UMX9 530 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 YBX2Q9Y2T7 364 aaKnown RBP11.11□□□□□ -0.63
GPC4-201ENST00000370828 TPRP12270 2363 aaKnown RBP11.11□□□□□ -0.63
GPC4-201ENST00000370828 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 SRP14P37108 136 aaKnown RBP11.11□□□□□ -0.63
GPC4-201ENST00000370828 EXT1Q16394 746 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 LRRC75AQ8NAA5 344 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 COMMD5Q9GZQ3 224 aa11.11□□□□□ -0.63
GPC4-201ENST00000370828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 FCGR3BO75015 233 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 NDUFB4O95168 129 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 MPLP40238 635 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 OR8B8Q15620 311 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 PLPPR5Q32ZL2 321 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 HES3Q5TGS1 186 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 SLX4Q8IY92 1834 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 DNASE2BQ8WZ79 361 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 FOXB1Q99853 325 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 MTCH2Q9Y6C9 303 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 NEURL1O76050 574 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 HIST1H1EP10412 219 aaKnown RBP11.1□□□□□ -0.63
GPC4-201ENST00000370828 CAPZBP47756 277 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 PPP1CAP62136 330 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 FZD5Q13467 585 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 NAT6Q93015 286 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 HS3ST3A1Q9Y663 406 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 H3BVH4 76 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 APCSP02743 223 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 DEFA4P12838 97 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 ZNF32P17041 273 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 RPS4Y1P22090 263 aaKnown RBP11.1□□□□□ -0.63
GPC4-201ENST00000370828 STARD6P59095 220 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 MRPS21P82921 87 aaKnown RBP11.1□□□□□ -0.63
GPC4-201ENST00000370828 ROM1Q03395 351 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 TMEM52Q8NDY8 209 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 OR4P4Q8NGL7 312 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 OR1N1Q8NGS0 311 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 SMIM8Q96KF7 97 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 DTX4Q9Y2E6 619 aa11.1□□□□□ -0.63
GPC4-201ENST00000370828 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 OR2J3O76001 311 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 FAM157CP0CG43 387 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 FSTP19883 344 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 ERHP84090 104 aaKnown RBP11.09□□□□□ -0.63
GPC4-201ENST00000370828 HIKESHIQ53FT3 197 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 NGFRP08138 427 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 ARR3P36575 388 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 SUMO3P55854 103 aaPredicted RBP11.09□□□□□ -0.63
GPC4-201ENST00000370828 EIF3IQ13347 325 aaKnown RBP11.09□□□□□ -0.63
GPC4-201ENST00000370828 LY6G6FQ5SQ64 297 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 BIVMQ86UB2 503 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 TRAV39A0A0B4J263 110 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 SRSF10O75494 262 aaKnown RBP11.09□□□□□ -0.63
GPC4-201ENST00000370828 NGFP01138 241 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 SLC25A5P05141 298 aaKnown RBP11.09□□□□□ -0.63
GPC4-201ENST00000370828 PNLIPP16233 465 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 COL10A1Q03692 680 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 GAGE1Q13065 139 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 DEFB108BQ8NET1 73 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 GPHA2Q96T91 129 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 A6NNC1 897 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 M0R296 226 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 FAM87AP0C7U9 286 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 PSG2P11465 335 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 PSG5Q15238 335 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 KIAA1644Q3SXP7 199 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
GPC4-201ENST00000370828 PARLQ9H300 379 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 FAM60AQ9NP50 221 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 LHX9Q9NQ69 397 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 PSG11Q9UQ72 335 aa11.09□□□□□ -0.63
GPC4-201ENST00000370828 IGKV1D-16P01601 117 aa11.08□□□□□ -0.64
GPC4-201ENST00000370828 UBE2V1Q13404 147 aa11.08□□□□□ -0.64
GPC4-201ENST00000370828 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.08□□□□□ -0.64
GPC4-201ENST00000370828 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
GPC4-201ENST00000370828 KIAA0100Q14667 2235 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms