RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 TRAM1Q15629 374 aa0.78□□□□□ -2.28
RNU4-48P-201ENST00000365559 HNRNPA1L2Q32P51 320 aaKnown RBP0.78□□□□□ -2.28
RNU4-48P-201ENST00000365559 Q6ZRN7 208 aaPredicted RBP0.78□□□□□ -2.28
RNU4-48P-201ENST00000365559 Q6ZT83 130 aa0.78□□□□□ -2.28
RNU4-48P-201ENST00000365559 FAM183BPQ6ZVS7 135 aa0.78□□□□□ -2.28
RNU4-48P-201ENST00000365559 TMBIM1Q969X1 311 aa0.78□□□□□ -2.28
RNU4-48P-201ENST00000365559 TAPBPLQ9BX59 468 aa0.78□□□□□ -2.28
RNU4-48P-201ENST00000365559 RNASEK-C17orf49H0YIS7 233 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 K7EQS6 105 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 CDIPTO14735 213 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 ZMPSTE24O75844 475 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 EPPINO95925 133 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 ANGP03950 147 aaKnown RBP0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 NQO1P15559 274 aaKnown RBP0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 LPAR6P43657 344 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 TRIP13Q15645 432 aaPredicted RBP0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 CAVIN4Q5BKX8 364 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 FAM162BQ5T6X4 162 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 LGALS9CQ6DKI2 356 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 SELENOHQ8IZQ5 122 aaKnown RBP0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 CNPY4Q8N129 248 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 OR9I1Q8NGQ6 314 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 OR4X1Q8NH49 305 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 GTF2H4Q92759 462 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 PGLYRP3Q96LB9 341 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 GPR22Q99680 433 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 SMDT1Q9H4I9 107 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 TMBIM4Q9HC24 238 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 TAS2R13Q9NYV9 303 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 FBXL3Q9UKT7 428 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 PTPRJQ12913 1337 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 USP42Q9H9J4 1324 aaKnown RBP0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 MYO15BQ96JP2 1530 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 SDK1Q7Z5N4 2213 aa0.77□□□□□ -2.29
RNU4-48P-201ENST00000365559 NYNRINQ9P2P1 1898 aaKnown RBP0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 ADAMTSL1Q8N6G6 1762 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 RTEL1-TNFRSF6BF6WH68 1400 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 MGAT4DA6NG13 374 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 UBDO15205 165 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 OTCP00480 354 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 CD36P16671 472 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 ALOX5APP20292 161 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 PTNP21246 168 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 PDGFRLQ15198 375 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 EBLN2Q6P2I7 272 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 VN1R4Q7Z5H5 301 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 TRIML2Q8N7C3 387 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 MITD1Q8WV92 249 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 OR5P2Q8WZ92 322 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 Q9BRP9 147 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 UPK3BQ9BT76 320 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 MRPL32Q9BYC8 188 aaKnown RBP0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 TXNL4BQ9NX01 149 aaKnown RBP0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 CLEC2DQ9UHP7 191 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 USH1CQ9Y6N9 552 aa0.76□□□□□ -2.29
RNU4-48P-201ENST00000365559 MYO5BQ9ULV0 1848 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 IGLV3-9A0A075B6K5 115 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 PSMD11O00231 422 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 POLR3GO15318 223 aaPredicted RBP0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 GPX1P07203 203 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 LYNX1P0DP58 116 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 RPA3P35244 121 aaPredicted RBP0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 AQP5P55064 265 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 C1QTNF8P60827 252 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 CCDC121Q6ZUS5 278 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 OR11L1Q8NGX0 322 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 C16orf78Q8WTQ4 265 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 TMIGD2Q96BF3 282 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 NAP1L5Q96NT1 182 aaPredicted RBP0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 FAAP24Q9BTP7 215 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 HAUS4Q9H6D7 363 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 C11orf49Q9H6J7 331 aa0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 BZW2Q9Y6E2 419 aaKnown RBP0.75□□□□□ -2.29
RNU4-48P-201ENST00000365559 PLCH2O75038 1416 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 B4DEV8 164 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 LY6HO94772 140 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 IGHV3-30-3P0DP02 117 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 PSMA1P25786 263 aaKnown RBP0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 PEBP1P30086 187 aaKnown RBP0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 AKR1C2P52895 323 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 GABARAPL2P60520 117 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 CD164Q04900 197 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 SKP2Q13309 424 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 VAMP3Q15836 100 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 MRPL51Q4U2R6 128 aaKnown RBP0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 PDCL2Q8N4E4 241 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 OR11H1Q8NG94 326 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 OR4X2Q8NGF9 303 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 OR5D18Q8NGL1 313 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 ZNRF2Q8NHG8 242 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 GALMQ96C23 342 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 EBNA1BP2Q99848 306 aaKnown RBP0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 ZNF426Q9BUY5 554 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 HINT2Q9BX68 163 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 C1QTNF6Q9BXI9 259 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 PECRQ9BY49 303 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 OR51E2Q9H255 320 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 IFT46Q9NQC8 304 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 SCML1Q9UN30 329 aa0.74□□□□□ -2.29
RNU4-48P-201ENST00000365559 COL6A6A6NMZ7 2263 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms