RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 SYCP1Q15431 976 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 USF2Q15853 346 aaPredicted RBP0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 RBM48Q5RL73 367 aaKnown RBP0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 EBLN2Q6P2I7 272 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 SPNS3Q6ZMD2 512 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 LRRC6Q86X45 466 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 TCAIMQ8N3R3 496 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 FER1L6-AS1Q8NA97 138 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 OR11L1Q8NGX0 322 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 ZNRF2Q8NHG8 242 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 CMTM2Q8TAZ6 248 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 DYNC2LI1Q8TCX1 351 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 CASTOR1Q8WTX7 329 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 CYTH2Q99418 400 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 UPK3BQ9BT76 320 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 CD300AQ9UGN4 299 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 NAGKQ9UJ70 344 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 FBXL3Q9UKT7 428 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 URGCP-MRPS24S4R325 110 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 PRRC2BQ5JSZ5 2229 aaKnown RBP0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 PLCH2O75038 1416 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 CRB1P82279 1406 aa0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 COL5A3P25940 1745 aaPredicted RBP0.94□□□□□ -2.26
RNU4-56P-201ENST00000364700 FN1P02751 2386 aaKnown RBP0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 NCKAP5O14513 1909 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 TMEM213A2RRL7 107 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 C17orf51A8MQB3 221 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 GOLGA8RI6L899 631 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 DEDDO75618 318 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 TNFAIP8O95379 198 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 SYT1P21579 422 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 KDELR2P33947 212 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 RAB2AP61019 212 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 PAFAH1B3Q15102 231 aaKnown RBP0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 NIPAL1Q6NVV3 410 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 XKRXQ6PP77 449 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 OLIG3Q7RTU3 272 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 C10orf107Q8IVU9 208 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 C2orf73Q8N5S3 287 aaPredicted RBP0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 Q8NDZ9 215 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 OR10P1Q8NGE3 313 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 TMEM56Q96MV1 263 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 OR8B2Q96RD0 313 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 APOL4Q9BPW4 351 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 SLC19A3Q9BZV2 496 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 C11orf49Q9H6J7 331 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 SPACA1Q9HBV2 294 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 SLX4Q8IY92 1834 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 MUC6Q6W4X9 2439 aa0.93□□□□□ -2.26
RNU4-56P-201ENST00000364700 RAD50Q92878 1312 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 DICER1Q9UPY3 1922 aaKnown RBP0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 MALRD1Q5VYJ5 2156 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 SMLR1H3BR10 107 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 PHYHO14832 338 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 DENRO43583 198 aaKnown RBP0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 PSCAO43653 123 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 SYNGR2O43760 224 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 PSIP1O75475 530 aaKnown RBP0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 CTSGP08311 255 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 IGHV3-30-3P0DP02 117 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 MLNP12872 115 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 PSMB9P28065 219 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 PSMB6P28072 239 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 S100A2P29034 98 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 GZMMP51124 257 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 LINC00313P59037 77 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 PMS2P3Q13401 168 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 APOFQ13790 326 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 C4orf26Q17RF5 130 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 LGALSLQ3ZCW2 172 aaPredicted RBP0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 FAM229BQ4G0N7 80 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 HENMT1Q5T8I9 393 aaKnown RBP0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 BOD1L2Q8IYS8 172 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 OR5D18Q8NGL1 313 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 LMX1AQ8TE12 382 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 CCDC127Q96BQ5 260 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 TAMM41Q96BW9 452 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 UGT2B28Q9BY64 529 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 ASCL3Q9NQ33 180 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 EURLQ9NYK6 297 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 VPREB3Q9UKI3 123 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 MCTS1Q9ULC4 181 aaKnown RBP0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 CCL26Q9Y258 94 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 MRPS16Q9Y3D3 137 aaKnown RBP0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 ZNF337Q9Y3M9 751 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 PTPRBP23467 1997 aa0.92□□□□□ -2.26
RNU4-56P-201ENST00000364700 MAP3K19Q56UN5 1328 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 SLIT2O94813 1529 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 LOC102725191A0A1B0GVB3 256 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 LINC00854A0A1B0GVQ3 168 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 ODF3BA8MYP8 253 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 C9J4A7 227 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 F5H5K5 113 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 G3V3Q6 166 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 H3BSA7 217 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 SULT1C2O00338 296 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 TOX3O15405 576 aaPredicted RBP0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 ZNF189O75820 626 aaPredicted RBP0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 CBR3O75828 277 aa0.91□□□□□ -2.26
RNU4-56P-201ENST00000364700 AKR1C4P17516 323 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms