RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 IFNA17P01571 189 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 BMP5P22003 454 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 ZNF726P1Q15940 193 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 WDR25Q64LD2 544 aaPredicted RBP9.02□□□□□ -0.97
SMC3-201ENST00000361804 NECAP1Q8NC96 275 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 RNASE11Q8TAA1 199 aaKnown RBP9.02□□□□□ -0.97
SMC3-201ENST00000361804 RPRMQ9NS64 109 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 FAM166BA8MTA8 275 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 GALR2O43603 387 aaPredicted RBP9.02□□□□□ -0.97
SMC3-201ENST00000361804 EXT1Q16394 746 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 TMEM56Q96MV1 263 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 PRO1933Q9H354 126 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 MRPS17Q9Y2R5 130 aaKnown RBP9.02□□□□□ -0.97
SMC3-201ENST00000361804 RNF115Q9Y4L5 304 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 TMEM56-RWDD3S4R434 201 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 CXorf65A6NEN9 183 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 COL8A2P25067 703 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 RAB5CP51148 216 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 UCP3P55916 312 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 DBX2Q6ZNG2 339 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 OR2V1Q8NHB1 315 aa9.02□□□□□ -0.97
SMC3-201ENST00000361804 ZMAT5Q9UDW3 170 aaKnown RBP9.02□□□□□ -0.97
SMC3-201ENST00000361804 KIAA1324LA8MWY0 1029 aaPredicted RBP9.01□□□□□ -0.97
SMC3-201ENST00000361804 IGKV1-39P01597 117 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 IGKV1D-39P04432 117 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 FGF5P12034 268 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 ID3Q02535 119 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 PCSK4Q6UW60 755 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 OR2Y1Q8NGV0 311 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 ABHD5Q8WTS1 349 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 FRZBQ92765 325 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 PLA2G3Q9NZ20 509 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 SVILO95425 2214 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 C9J4A7 227 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 NAPSAO96009 420 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 HOXA5P20719 270 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 LINC00205P59089 165 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 EIF3IQ13347 325 aaKnown RBP9.01□□□□□ -0.97
SMC3-201ENST00000361804 TRIM61Q5EBN2 209 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 ADGRG7Q96K78 797 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 SGCZQ96LD1 299 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 PFDN5Q99471 154 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 CACNG5Q9UF02 275 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 NOSIPQ9Y314 301 aaKnown RBP9.01□□□□□ -0.97
SMC3-201ENST00000361804 RAB2AP61019 212 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 HAPLN4Q86UW8 402 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 ZDHHC23Q8IYP9 409 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 KIAA1456Q9P272 454 aa9.01□□□□□ -0.97
SMC3-201ENST00000361804 SLC34A2O95436 690 aa9□□□□□ -0.97
SMC3-201ENST00000361804 FABP4P15090 132 aa9□□□□□ -0.97
SMC3-201ENST00000361804 KRTAP27-1Q3LI81 207 aa9□□□□□ -0.97
SMC3-201ENST00000361804 SPINK9Q5DT21 86 aa9□□□□□ -0.97
SMC3-201ENST00000361804 MRPL21Q7Z2W9 205 aaKnown RBP9□□□□□ -0.97
SMC3-201ENST00000361804 ZNF610Q8N9Z0 462 aa9□□□□□ -0.97
SMC3-201ENST00000361804 CCDC54Q8NEL0 328 aa9□□□□□ -0.97
SMC3-201ENST00000361804 NIPSNAP3BQ9BS92 247 aa9□□□□□ -0.97
SMC3-201ENST00000361804 MAP1BP46821 2468 aaKnown RBP9□□□□□ -0.97
SMC3-201ENST00000361804 IFNL4K9M1U5 179 aa9□□□□□ -0.97
SMC3-201ENST00000361804 MRPL33O75394 65 aaKnown RBP9□□□□□ -0.97
SMC3-201ENST00000361804 TRGC1P0CF51 173 aa9□□□□□ -0.97
SMC3-201ENST00000361804 VDAC1P21796 283 aa9□□□□□ -0.97
SMC3-201ENST00000361804 SRD5A2P31213 254 aa9□□□□□ -0.97
SMC3-201ENST00000361804 FOLR3P41439 243 aa9□□□□□ -0.97
SMC3-201ENST00000361804 CEBPDP49716 269 aaPredicted RBP9□□□□□ -0.97
SMC3-201ENST00000361804 ZXDAP98168 799 aa9□□□□□ -0.97
SMC3-201ENST00000361804 KHDC3LQ587J8 217 aa9□□□□□ -0.97
SMC3-201ENST00000361804 MRPL30Q8TCC3 161 aaKnown RBP9□□□□□ -0.97
SMC3-201ENST00000361804 GATAD1Q8WUU5 269 aa9□□□□□ -0.97
SMC3-201ENST00000361804 INTS12Q96CB8 462 aaKnown RBP9□□□□□ -0.97
SMC3-201ENST00000361804 SNX22Q96L94 193 aa9□□□□□ -0.97
SMC3-201ENST00000361804 C12orf49Q9H741 205 aa9□□□□□ -0.97
SMC3-201ENST00000361804 TRAV24A0A0B4J272 114 aa9□□□□□ -0.97
SMC3-201ENST00000361804 HSPA12AO43301 675 aa9□□□□□ -0.97
SMC3-201ENST00000361804 PGA5P0DJD9 388 aa9□□□□□ -0.97
SMC3-201ENST00000361804 S100PP25815 95 aa9□□□□□ -0.97
SMC3-201ENST00000361804 UCP1P25874 307 aa9□□□□□ -0.97
SMC3-201ENST00000361804 FKBP2P26885 142 aaKnown RBP9□□□□□ -0.97
SMC3-201ENST00000361804 CD200P41217 278 aa9□□□□□ -0.97
SMC3-201ENST00000361804 TCEAL6Q6IPX3 200 aa9□□□□□ -0.97
SMC3-201ENST00000361804 PPP1R32Q7Z5V6 425 aa9□□□□□ -0.97
SMC3-201ENST00000361804 LFNGQ8NES3 379 aa9□□□□□ -0.97
SMC3-201ENST00000361804 MALSU1Q96EH3 234 aa9□□□□□ -0.97
SMC3-201ENST00000361804 SF3B5Q9BWJ5 86 aaKnown RBP9□□□□□ -0.97
SMC3-201ENST00000361804 C1QTNF5Q9BXJ0 243 aa9□□□□□ -0.97
SMC3-201ENST00000361804 WDR54Q9H977 334 aa9□□□□□ -0.97
SMC3-201ENST00000361804 RNF150Q9ULK6 438 aa9□□□□□ -0.97
SMC3-201ENST00000361804 TNRC6AQ8NDV7 1962 aaKnown RBP9□□□□□ -0.97
SMC3-201ENST00000361804 SIRPB1O00241 398 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 WDR1O75083 606 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 CA6P23280 308 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 PMELP40967 661 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 PRSS8Q16651 343 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 FAM90A2PQ658T7 463 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 OR2T2Q6IF00 324 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 TIPARPQ7Z3E1 657 aaKnown RBP8.99□□□□□ -0.97
SMC3-201ENST00000361804 WDR5BQ86VZ2 330 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 TVP23CQ96ET8 276 aa8.99□□□□□ -0.97
SMC3-201ENST00000361804 ATP5SQ99766 215 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms