RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 TAF9BQ9HBM6 251 aa11.29□□□□□ -0.6
CCDC197-201ENST00000359253 OR6C3Q9NZP0 311 aa11.29□□□□□ -0.6
CCDC197-201ENST00000359253 OR2W1Q9Y3N9 320 aa11.29□□□□□ -0.6
CCDC197-201ENST00000359253 PPIAL4EA0A075B759 164 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 TEX13DA0A0J9YY54 714 aaPredicted RBP11.28□□□□□ -0.6
CCDC197-201ENST00000359253 NKX6-3A6NJ46 265 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 PPIAL4DF5H284 164 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 TMEM178BH3BS89 294 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 GPR31O00270 319 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 GOSR2O14653 212 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 SPINT2O43291 252 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 WNT2P09544 360 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 PPIAL4FP0DN26 164 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 RPS2P15880 293 aaKnown RBP11.28□□□□□ -0.6
CCDC197-201ENST00000359253 C4BPBP20851 252 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 NFYAP23511 347 aaPredicted RBP11.28□□□□□ -0.6
CCDC197-201ENST00000359253 DNASE1P24855 282 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 RBMXP38159 391 aaKnown RBP11.28□□□□□ -0.6
CCDC197-201ENST00000359253 CEBPDP49716 269 aaPredicted RBP11.28□□□□□ -0.6
CCDC197-201ENST00000359253 PIGPP57054 158 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 SRPXP78539 464 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 HTD2P86397 168 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 HERPUD1Q15011 391 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 ZNF788Q6ZQV5 615 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 BOLLQ8N9W6 283 aaKnown RBP11.28□□□□□ -0.6
CCDC197-201ENST00000359253 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 OR2T35Q8NGX2 323 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 RTN4IP1Q8WWV3 396 aaPredicted RBP11.28□□□□□ -0.6
CCDC197-201ENST00000359253 TOMM40LQ969M1 308 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 COQ2Q96H96 371 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 TMPRSS13Q9BYE2 586 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 NAA60Q9H7X0 242 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 ASH1LQ9NR48 2969 aaKnown RBP11.28□□□□□ -0.6
CCDC197-201ENST00000359253 PIPOXQ9P0Z9 390 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 KIF25Q9UIL4 384 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 PPIAL4AQ9Y536 164 aa11.28□□□□□ -0.6
CCDC197-201ENST00000359253 FLNBO75369 2602 aaKnown RBP11.27□□□□□ -0.6
CCDC197-201ENST00000359253 IGKV1-6A0A0C4DH72 117 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 SIAH2O43255 324 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 HSPA12AO43301 675 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 CD8AP01732 235 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 IL2RGP31785 369 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 LUMP51884 338 aaPredicted RBP11.27□□□□□ -0.61
CCDC197-201ENST00000359253 FXYD4P59646 89 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 SUPT4H1P63272 117 aaKnown RBP11.27□□□□□ -0.61
CCDC197-201ENST00000359253 AESQ08117 197 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 BAMBIQ13145 260 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 SPRNQ5BIV9 151 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 GSG1LQ6UXU4 331 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 ZNF295-AS1Q8N0V1 137 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 LRTM2Q8N967 370 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 CASTOR1Q8WTX7 329 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 RAB1BQ9H0U4 201 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 SLC2A9Q9NRM0 540 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 CBLN4Q9NTU7 201 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 TMEM106BQ9NUM4 274 aa11.27□□□□□ -0.61
CCDC197-201ENST00000359253 CADP27708 2225 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 ODAMA1E959 279 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 SIGLEC5O15389 551 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 MPPED1O15442 326 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 CYB5R3P00387 301 aaPredicted RBP11.26□□□□□ -0.61
CCDC197-201ENST00000359253 PLAUP00749 431 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 GNRHRP30968 328 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 CD80P33681 288 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 P2RX3P56373 397 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 MRPS11P82912 194 aaKnown RBP11.26□□□□□ -0.61
CCDC197-201ENST00000359253 HFEQ30201 348 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 LDLRAD3Q86YD5 345 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 OR10V1Q8NGI7 309 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 NEUROG1Q92886 237 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 NINJ1Q92982 152 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 NMES1Q9C002 83 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 SLC5A7Q9GZV3 580 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 COMMD9Q9P000 198 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 LPAR3Q9UBY5 353 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 MAB21L2Q9Y586 359 aa11.26□□□□□ -0.61
CCDC197-201ENST00000359253 UTP20O75691 2785 aaKnown RBP11.26□□□□□ -0.61
CCDC197-201ENST00000359253 IGHV1-69-2A0A0G2JMI3 117 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 DUXBA0A1W2PPF3 345 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 HMSDA8MTL9 139 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 C3orf80F5H4A9 247 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 IFNA21P01568 189 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 PI3P19957 117 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 GLIPR1P48060 266 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 H2BFSP57053 126 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 SNTB1Q13884 538 aaKnown RBP11.25□□□□□ -0.61
CCDC197-201ENST00000359253 ESCO2Q56NI9 601 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 LY6G6FQ5SQ64 297 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 LGI3Q8N145 548 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 BVESQ8NE79 360 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 SECTM1Q8WVN6 248 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 NEU4Q8WWR8 484 aaPredicted RBP11.25□□□□□ -0.61
CCDC197-201ENST00000359253 IL1F10Q8WWZ1 152 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 CORO2AQ92828 525 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 GAFA1Q96PS6 74 aa11.25□□□□□ -0.61
CCDC197-201ENST00000359253 PDCD10Q9BUL8 212 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms