RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 CLCF1Q9UBD9 225 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 TRBV6-6A0A0A6YYG2 114 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 J3QW42 95 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 TUSC2O75896 110 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 TSPAN15O95858 294 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 MMP9P14780 707 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 ZNF14P17017 642 aaPredicted RBP12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 GNRHRP30968 328 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 PEA15Q15121 130 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 TSC22D1Q15714 1073 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 SPATA46Q5T0L3 261 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 GFRALQ6UXV0 394 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 DMBX1Q8NFW5 382 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 OR52M1Q8NGK5 317 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 C11orf1Q9H5F2 150 aa12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 RCL1Q9Y2P8 373 aaKnown RBP12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 UBE2J1Q9Y385 318 aaPredicted RBP12.14□□□□□ -0.47
NIPAL3-203ENST00000358028 FAM157AC9JC47 383 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 HSPB6O14558 160 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 SCTP09683 121 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 IGHV1-2P23083 117 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 CA6P23280 308 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 PAX6P26367 422 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 NPBWR1P48145 328 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 EIF2S3LQ2VIR3 472 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 TMEM88Q6PEY1 159 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 C5orf24Q7Z6I8 188 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 FAM58AQ8N1B3 248 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 SUMF2Q8NBJ7 301 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 OR10Z1Q8NGY1 313 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 OR51I2Q9H344 312 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 ZDHHC8Q9ULC8 765 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 ATP23Q9Y6H3 246 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 NAV2Q8IVL1 2488 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 J3QT63 122 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 SMPD2O60906 423 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 CELA3BP08861 270 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 OR8U9P0C7N5 309 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 CD80P33681 288 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 UBE2NP61088 152 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 TBC1D26Q86UD7 250 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 MYPOPQ86VE0 399 aaPredicted RBP12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 CBLN2Q8IUK8 224 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 ZNF695Q8IW36 515 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 LFNGQ8NES3 379 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 OR8U1Q8NH10 309 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 MRPL30Q8TCC3 161 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 BOD1Q96IK1 185 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 TRIB1Q96RU8 372 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 SLC25A31Q9H0C2 315 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 CDH20Q9HBT6 801 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 MLXQ9UH92 298 aa12.13□□□□□ -0.47
NIPAL3-203ENST00000358028 GLI4P10075 376 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 UCP1P25874 307 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 S100GP29377 79 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 SNCAP37840 140 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 NKX2-1P43699 371 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 PPP1CBP62140 327 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 TGFBR3Q03167 851 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 ZNF266Q14584 549 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 HERPUD1Q15011 391 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 MEX3BQ6ZN04 569 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 SELENOHQ8IZQ5 122 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 OR2C3Q8N628 320 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 PRR7Q8TB68 274 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 ADAT1Q9BUB4 502 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 RTL8AQ9BWD3 113 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 CACFD1Q9UGQ2 172 aa12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 KLF2Q9Y5W3 355 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-203ENST00000358028 DIDO1Q9BTC0 2240 aaKnown RBP12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 SPTBN1Q01082 2364 aaKnown RBP12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 TRAV24A0A0B4J272 114 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 A0A1B0GW64 132 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 A0A1W2PR80 420 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 NKX2-6A6NCS4 301 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 CYSRT1A8MQ03 144 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 PITX3O75364 302 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 WNT2P09544 360 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 CAMLGP49069 296 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 KRTCAP3Q53RY4 240 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 FAM214BQ7L5A3 538 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 MED12LQ86YW9 2145 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 CMTM1Q8IZ96 169 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 C17orf78Q8N4C9 275 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 SECTM1Q8WVN6 248 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 BSCL2Q96G97 398 aaPredicted RBP12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 USB1Q9BQ65 265 aaKnown RBP12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 SMCO4Q9NRQ5 59 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 C19orf12Q9NSK7 152 aa12.11□□□□□ -0.47
NIPAL3-203ENST00000358028 IGKV1-6A0A0C4DH72 117 aa12.1□□□□□ -0.47
NIPAL3-203ENST00000358028 H0Y980 276 aa12.1□□□□□ -0.47
NIPAL3-203ENST00000358028 AQP7O14520 342 aa12.1□□□□□ -0.47
NIPAL3-203ENST00000358028 HS3ST1O14792 307 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms