RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 PRSS12P56730 875 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 LCN2P80188 198 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 RUNX1Q01196 453 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 TMEM241Q24JQ0 296 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 RSPO1Q2MKA7 263 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-205ENST00000357568 C4orf17Q53FE4 359 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 CXorf66Q5JRM2 361 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-205ENST00000357568 THNSL2Q86YJ6 484 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 SCGB1C1Q8TD33 95 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 OPN3Q9H1Y3 402 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-205ENST00000357568 RFNGQ9Y644 331 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 PCNX3Q9H6A9 2034 aa9.15□□□□□ -0.94
CAPN3-205ENST00000357568 B4E171 279 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 NTN3O00634 580 aaPredicted RBP9.15□□□□□ -0.95
CAPN3-205ENST00000357568 TMEM11P17152 192 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 TCN2P20062 427 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 CRYGSP22914 178 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 TDGF1P3P51864 188 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 TMEM41BQ5BJD5 291 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 WDR74Q6RFH5 385 aaPredicted RBP9.15□□□□□ -0.95
CAPN3-205ENST00000357568 DEFB124Q8NES8 71 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 BORCS8Q96FH0 119 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 SNHG12Q9BXW3 62 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 RPRMQ9NS64 109 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 GPR173Q9NS66 373 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 SEMA5BQ9P283 1151 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 MYOTQ9UBF9 498 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 PRSS50Q9UI38 385 aa9.15□□□□□ -0.95
CAPN3-205ENST00000357568 CUL9Q8IWT3 2517 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 OTOGLQ3ZCN5 2332 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 A0A1B0GX78 115 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 LRP5LA4QPB2 252 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 CHST1O43916 411 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 CST7O76096 145 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 VENTXO95231 258 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 FUT6P51993 359 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 GFERP55789 205 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 PAX5Q02548 391 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 ZNF154Q13106 437 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 CLN3Q13286 438 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 RSPO4Q2I0M5 234 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-205ENST00000357568 KRTAP27-1Q3LI81 207 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 TMEM123Q8N131 208 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 NFAM1Q8NET5 270 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-205ENST00000357568 GON4LQ3T8J9 2241 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 F5H5K5 113 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 H7BYZ3 331 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 VAMP5O95183 116 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 MDH2P40926 338 aaKnown RBP9.14□□□□□ -0.95
CAPN3-205ENST00000357568 RBM11P57052 281 aaKnown RBP9.14□□□□□ -0.95
CAPN3-205ENST00000357568 OR1D5P58170 312 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 BSXQ3C1V8 233 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 CARD17Q5XLA6 110 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 CPEB2Q7Z5Q1 589 aaKnown RBP9.14□□□□□ -0.95
CAPN3-205ENST00000357568 GBGT1Q8N5D6 347 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 MAGT1Q9H0U3 335 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 ZNF665Q9H7R5 613 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 GAB2Q9UQC2 676 aa9.14□□□□□ -0.95
CAPN3-205ENST00000357568 MUC6Q6W4X9 2439 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-205ENST00000357568 IGKV1-27A0A075B6S5 117 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 TOX3O15405 576 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-205ENST00000357568 FGF5P12034 268 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 CD99P14209 185 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 S100GP29377 79 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 PTGDSP41222 190 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 GALR1P47211 349 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 CCL7P80098 99 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 TRA2AQ13595 282 aaKnown RBP eCLIP9.13□□□□□ -0.95
CAPN3-205ENST00000357568 LRRC75BQ2VPJ9 315 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 P4HA3Q7Z4N8 544 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 PLXDC1Q8IUK5 500 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 LSM10Q969L4 123 aaKnown RBP9.13□□□□□ -0.95
CAPN3-205ENST00000357568 TAAR3PQ9P1P4 343 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 LAMP3Q9UQV4 416 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 KIR2DS1A0A191URI9 304 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 ZFP92A6NM28 416 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 MYF5P13349 255 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 OR10J1P30954 320 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 KIR2DS4P43632 304 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 CLDN15P56746 228 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 MRPS34P82930 218 aaKnown RBP9.13□□□□□ -0.95
CAPN3-205ENST00000357568 KIR2DS1Q14954 304 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 FAM27BQ5VT28 67 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 CDCP2Q5VXM1 449 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 SLC25A24Q6NUK1 477 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 ZNF880Q6PDB4 577 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 ZNF66Q6ZN08 573 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 DTX1Q86Y01 620 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 PRSS58Q8IYP2 241 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 OR2M3Q8NG83 312 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 SMIM7Q9BQ49 75 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 STRADBQ9C0K7 418 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 DLL3Q9NYJ7 618 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 OR6C3Q9NZP0 311 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 ST3GAL6Q9Y274 331 aa9.13□□□□□ -0.95
CAPN3-205ENST00000357568 A0A0C4DFX4 3053 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms