RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PRR18Q8N4B5 295 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 PLEKHJ1Q9NW61 149 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 AK6Q9Y3D8 172 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 V9GY05 133 aa12.7□□□□□ -0.38
TSPAN4-201ENST00000346501 M0QZK8 103 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 CHST1O43916 411 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 IGHV3-7P01780 117 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 GALP22466 123 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 BLVRBP30043 206 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 PRR31Q5SQ13 230 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 LDLRAD2Q5SZI1 272 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 OR8H3Q8N146 312 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 LEAP2Q969E1 77 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 CITED1Q99966 193 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 LIN7BQ9HAP6 207 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 NDUFB11Q9NX14 153 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 GFOD1Q9NXC2 390 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 ABRACLQ9P1F3 81 aa12.69□□□□□ -0.38
TSPAN4-201ENST00000346501 RGS11O94810 467 aa12.68□□□□□ -0.38
TSPAN4-201ENST00000346501 GAPDHP04406 335 aaKnown RBP12.68□□□□□ -0.38
TSPAN4-201ENST00000346501 HES1Q14469 280 aa12.68□□□□□ -0.38
TSPAN4-201ENST00000346501 P2RY14Q15391 338 aa12.68□□□□□ -0.38
TSPAN4-201ENST00000346501 OR10K2Q6IF99 312 aa12.68□□□□□ -0.38
TSPAN4-201ENST00000346501 TM2D1Q9BX74 207 aa12.68□□□□□ -0.38
TSPAN4-201ENST00000346501 RIMS4Q9H426 269 aaPredicted RBP12.68□□□□□ -0.38
TSPAN4-201ENST00000346501 TENM1Q9UKZ4 2725 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 TRAV1-2A0A0B4J238 106 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 TRDV1A0A1B0GX56 115 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 TMEM14DPA8MWL7 114 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 C12orf77C9JDV5 145 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 HBZP02008 142 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 VSIG10L2P0DP72 767 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 CD37P11049 281 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 CHATP28329 748 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 EFNB2P52799 333 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 MRPS15P82914 257 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 HERPUD1Q15011 391 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 UBE2UQ5VVX9 321 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 CCBE1Q6UXH8 406 aaPredicted RBP12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 THNSL2Q86YJ6 484 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 SPARTQ8N0X7 666 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 GAPTQ8N292 157 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 C8orf31Q8N9H6 132 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 GALMQ96C23 342 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 OCSTAMPQ9BR26 566 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 SLC25A33Q9BSK2 321 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 TAF9BQ9HBM6 251 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 STEAP1Q9UHE8 339 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 MGAT4AQ9UM21 535 aa12.67□□□□□ -0.38
TSPAN4-201ENST00000346501 IGHV3-43A0A0B4J1X8 118 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 LY6LH3BQJ8 138 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 HSD17B6O14756 317 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 TXNL1O43396 289 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 OR2F2O95006 317 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 IGHV3-43DP0DP04 118 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 RAB3BP20337 219 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 VDAC2P45880 294 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 SRSF4Q08170 494 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 SSX1Q16384 188 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 C2orf68Q2NKX9 166 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 SIGIRRQ6IA17 410 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 ZNF773Q6PK81 442 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 TREML4Q6UXN2 200 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 MOB1BQ7L9L4 216 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 C6orf201Q7Z4U5 140 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 LINC00311Q8N616 119 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 KLHDC1Q8N7A1 406 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 OR51D1Q8NGF3 324 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 OR56B1Q8NGI3 324 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 UBALD1Q8TB05 177 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 SETD6Q8TBK2 473 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 FAM3DQ96BQ1 224 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 RBM14Q96PK6 669 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 FAAP24Q9BTP7 215 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 VCX3AQ9NNX9 186 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 OR2S2Q9NQN1 319 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 SSR3Q9UNL2 185 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 SIGLEC9Q9Y336 463 aa12.66□□□□□ -0.38
TSPAN4-201ENST00000346501 A0A1W2PPE3 182 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 JUNBP17275 347 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 RCC1P18754 421 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 CD24P25063 80 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 UNC119Q13432 240 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 HES5Q5TA89 166 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 STEAP3Q658P3 488 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 CD200R1LQ6Q8B3 271 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 MOB3BQ86TA1 216 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 Q8N2B8 174 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 OR56B4Q8NH76 319 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 SULT4A1Q9BR01 284 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 NICN1Q9BSH3 213 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 ZNF702PQ9H963 129 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 MBNL3Q9NUK0 354 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 JPT1Q9UK76 154 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 RAB22AQ9UL26 194 aa12.65□□□□□ -0.38
TSPAN4-201ENST00000346501 METTL21EPA6NDL7 271 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 SNRNP70P08621 437 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 TMEM11P17152 192 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms