RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 FGF23Q9GZV9 251 aaPredicted RBP10.93□□□□□ -0.66
CLK3-201ENST00000345005 ST3GAL6Q9Y274 331 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 ATMQ13315 3056 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 IQCF6A8MYZ5 107 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 KCNAB3O43448 404 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 GPR137BO60478 399 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 F12P00748 615 aaPredicted RBP10.92□□□□□ -0.66
CLK3-201ENST00000345005 HOXB5P09067 269 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 CA6P23280 308 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 TMEM33P57088 247 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 TAF9Q16594 264 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 RTN4RL2Q86UN3 420 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 FBXL14Q8N1E6 418 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 GINS3Q9BRX5 216 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 CHD6Q8TD26 2715 aa10.92□□□□□ -0.66
CLK3-201ENST00000345005 TLN1Q9Y490 2541 aaKnown RBP10.91□□□□□ -0.66
CLK3-201ENST00000345005 IGHV2OR16-5A0A0B4J2B6 119 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 IGHV1-18A0A0C4DH31 117 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A10PA6NDY2 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A18PA6NE21 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A16PA6NEW6 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A20PA6NIJ5 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 CRYM-AS1A6NIL9 109 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A8PA6NJQ4 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A7PA6NKC0 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A22PA8MWA6 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A12PA8MX19 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 A8MXE2 369 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A5PA8MXJ8 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A23PA8MXZ1 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 TRAPPC2LH3BP13 241 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 LILRA1O75019 489 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A15PP0C7V4 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A13PP0C7W8 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A14PP0C7W9 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FAM90A24PP0C7X0 464 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 RBM11P57052 281 aaKnown RBP10.91□□□□□ -0.66
CLK3-201ENST00000345005 IL13RA2Q14627 380 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 MRGPRGQ86SM5 289 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 LRTM2Q8N967 370 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 OR8G5Q8NG78 346 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 KLF14Q8TD94 323 aaPredicted RBP10.91□□□□□ -0.66
CLK3-201ENST00000345005 S100PBPQ96BU1 408 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 MARS2Q96GW9 593 aaKnown RBP10.91□□□□□ -0.66
CLK3-201ENST00000345005 AKR1E2Q96JD6 320 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 CLCC1Q96S66 551 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 RTL8AQ9BWD3 113 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 SUCNR1Q9BXA5 334 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 FBXL17Q9UF56 701 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 A0A0G2JNJ9 132 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 C7orf77A4D0Y5 90 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 BTBD17A6NE02 478 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 IGHV2-5P01817 119 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 ZNF44P15621 663 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 RAB5AP20339 215 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 BMP5P22003 454 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 DTYMKP23919 212 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 CHATP28329 748 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 P2RY1P47900 373 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 ERVS71-1P61550 626 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 KLRB1Q12918 225 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 PSG7Q13046 419 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 GUK1Q16774 197 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 ZNF718Q3SXZ3 478 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 C6orf201Q7Z4U5 140 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 ZFP82Q8N141 532 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 EDARADDQ8WWZ3 215 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 SLAMF9Q96A28 289 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 GALNT14Q96FL9 552 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 RBM14Q96PK6 669 aaKnown RBP10.91□□□□□ -0.66
CLK3-201ENST00000345005 SYT3Q9BQG1 590 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 PKIBQ9C010 78 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 SLC35B3Q9H1N7 401 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 ELOVL5Q9NYP7 299 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 Q9UFV3 132 aa10.91□□□□□ -0.66
CLK3-201ENST00000345005 AP4M1O00189 453 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 GEMIN2O14893 280 aaKnown RBP10.9□□□□□ -0.66
CLK3-201ENST00000345005 BCL3P20749 454 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 NPBWR2P48146 333 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 CAMLGP49069 296 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 PPT1P50897 306 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 FGF12P61328 243 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 DEFA6Q01524 100 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 PIGYQ3MUY2 71 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 PRR30Q53SZ7 412 aaPredicted RBP10.9□□□□□ -0.66
CLK3-201ENST00000345005 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 ZCCHC14Q8WYQ9 949 aaKnown RBP10.9□□□□□ -0.66
CLK3-201ENST00000345005 FAAP24Q9BTP7 215 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 PLK3Q9H4B4 646 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 KCNJ16Q9NPI9 418 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 PKD1L2Q7Z442 2459 aa10.9□□□□□ -0.66
CLK3-201ENST00000345005 M0R036 132 aa10.89□□□□□ -0.67
CLK3-201ENST00000345005 PDCD6O75340 191 aa10.89□□□□□ -0.67
CLK3-201ENST00000345005 KNG1P01042 644 aa10.89□□□□□ -0.67
CLK3-201ENST00000345005 FUT3P21217 361 aa10.89□□□□□ -0.67
CLK3-201ENST00000345005 GCH1P30793 250 aa10.89□□□□□ -0.67
CLK3-201ENST00000345005 RAB2AP61019 212 aa10.89□□□□□ -0.67
CLK3-201ENST00000345005 SRPXP78539 464 aa10.89□□□□□ -0.67
CLK3-201ENST00000345005 IL24Q13007 206 aa10.89□□□□□ -0.67
CLK3-201ENST00000345005 GGNBP1Q5YKI7 109 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms