RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 IL11P20809 199 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 RSPO4Q2I0M5 234 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-202ENST00000342494 DCAF16Q9NXF7 216 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 TRAV8-7A0A075B6U6 113 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 IGHV3-72A0A0B4J1Y9 119 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 MBPP02686 304 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-202ENST00000342494 CSN3P07498 182 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 RPL27AP46776 148 aaKnown RBP13.04□□□□□ -0.32
UBE3B-202ENST00000342494 B2MP61769 119 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 RANP62826 216 aaKnown RBP13.04□□□□□ -0.32
UBE3B-202ENST00000342494 EBLN2Q6P2I7 272 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 CABIN1Q9Y6J0 2220 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 ABCA3Q99758 1704 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 ADAM11O75078 769 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 PSG2P11465 335 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 INPP5JQ15735 1006 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-202ENST00000342494 VAMP8Q9BV40 100 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 C11orf94C9JXX5 98 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 DXOO77932 396 aaKnown RBP13.04□□□□□ -0.32
UBE3B-202ENST00000342494 GFRA1P56159 465 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 MOGAT2Q3SYC2 334 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 SEC11CQ9BY50 192 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 DLL1O00548 723 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 NDUFA2O43678 99 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 MC5RP33032 325 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 KIR2DL2P43627 348 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-202ENST00000342494 RNFT1Q5M7Z0 435 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 TEPPQ6URK8 271 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 C16orf82Q7Z2V1 217 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 IGKV1-8A0A0C4DH67 115 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 SMPD2O60906 423 aa13.04□□□□□ -0.32
UBE3B-202ENST00000342494 SNRNP40Q96DI7 357 aaKnown RBP13.04□□□□□ -0.32
UBE3B-202ENST00000342494 MCM3APO60318 1980 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 FAM157CP0CG43 387 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 GCSAMQ8N6F7 178 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 MRPL24Q96A35 216 aaKnown RBP13.03□□□□□ -0.32
UBE3B-202ENST00000342494 SFXN3Q9BWM7 321 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 PITPNC1Q9UKF7 332 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 DUXBA0A1W2PPF3 345 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 AREGP15514 252 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 TOMM20LQ6UXN7 152 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 EIF4E3Q8N5X7 224 aaKnown RBP13.03□□□□□ -0.32
UBE3B-202ENST00000342494 BVESQ8NE79 360 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 CCL19Q99731 98 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 HIGD1AQ9Y241 93 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 A0A1B0GU03 582 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 MFNGO00587 321 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 CTDSPLO15194 276 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 MPV17P39210 176 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 KIR3DL2P43630 455 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 TCL1AP56279 114 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 RIGQ13278 110 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 ARAP2Q8WZ64 1704 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 TRBV5-3A0A0A0MS03 114 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 LNP1A1A4G5 178 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 TTRP02766 147 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 KLF9Q13886 244 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-202ENST00000342494 RNF151Q2KHN1 245 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 FAM181AQ8N9Y4 354 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 NUP37Q8NFH4 326 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 OR1L6Q8NGR2 347 aa13.03□□□□□ -0.32
UBE3B-202ENST00000342494 NKX2-6A6NCS4 301 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 HPRT1P00492 218 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 COX6A1P12074 109 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.32
UBE3B-202ENST00000342494 CCKARP32238 428 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 SULT1A1P50225 295 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 PDLIM4P50479 330 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 KHDC3LQ587J8 217 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 A0A0U1RQV5 110 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 ZNHIT1O43257 154 aa13.02□□□□□ -0.32
UBE3B-202ENST00000342494 METTL1Q9UBP6 276 aaKnown RBP13.02□□□□□ -0.32
UBE3B-202ENST00000342494 ASAH2BP0C7U1 165 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 WNT5AP41221 380 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 CALHM1Q8IU99 346 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 OR1K1Q8NGR3 316 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 ZPLD1Q8TCW7 415 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 MFSD2BA6NFX1 497 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 PHOX2AO14813 284 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 TO15178 435 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 RRN3P1Q2M238 152 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 OR4A5Q8NH83 315 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
UBE3B-202ENST00000342494 NXF2Q9GZY0 626 aaKnown RBP13.02□□□□□ -0.33
UBE3B-202ENST00000342494 GHITMQ9H3K2 345 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 RNF224P0DH78 156 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 LYZL2Q7Z4W2 148 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 OR10C1Q96KK4 312 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 CYB5R1Q9UHQ9 305 aa13.02□□□□□ -0.33
UBE3B-202ENST00000342494 RBFOX3A6NFN3 312 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 TMEM229AB2RXF0 380 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 SMAD7O15105 426 aaKnown RBP13.01□□□□□ -0.33
UBE3B-202ENST00000342494 CDS2O95674 445 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 HBZP02008 142 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 NAT2P11245 290 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 LRRC75BQ2VPJ9 315 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 UNQ5815/PRO19632Q6UWF5 114 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 ZNF826PQ6ZT77 177 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 FOXJ2Q9P0K8 574 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms