RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PLPPR2Q96GM1 343 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 C7orf77A4D0Y5 90 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 SYNGR1O43759 233 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 THBS4P35443 961 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 PPP1CBP62140 327 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 ANKRD55Q3KP44 614 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 OR2A2Q6IF42 318 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 ZCCHC24Q8N2G6 241 aaKnown RBP11.18□□□□□ -0.62
COL18A1-201ENST00000342220 NUDT16L1Q9BRJ7 211 aaKnown RBP11.18□□□□□ -0.62
COL18A1-201ENST00000342220 CLCF1Q9UBD9 225 aa11.18□□□□□ -0.62
COL18A1-201ENST00000342220 TRBV6-7A0A0A0MS04 114 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 CDIPTO14735 213 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 SFT2D2O95562 160 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 TMPRSS3P57727 454 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 SUPT4H1P63272 117 aaKnown RBP11.17□□□□□ -0.62
COL18A1-201ENST00000342220 NOTCH2Q04721 2471 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 AARDQ4LEZ3 155 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 OR5H2Q8NGV7 314 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 OR13G1Q8NGZ3 307 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 PP6455Q8WZ26 134 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 RTBDNQ9BSG5 229 aaPredicted RBP11.17□□□□□ -0.62
COL18A1-201ENST00000342220 GPR61Q9BZJ8 451 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 OR2S2Q9NQN1 319 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 OSGIN2Q9Y236 505 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 SHANK1Q9Y566 2161 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 A0A1W2PPE2 198 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 K7ENP7 123 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 GCH1P30793 250 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 VAX1Q5SQQ9 334 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 ETFRF1Q6IPR1 90 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 INO80CQ6PI98 192 aaPredicted RBP11.17□□□□□ -0.62
COL18A1-201ENST00000342220 DEFB108BQ8NET1 73 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 IL1F10Q8WWZ1 152 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 ZCCHC14Q8WYQ9 949 aaKnown RBP11.17□□□□□ -0.62
COL18A1-201ENST00000342220 STARD4Q96DR4 205 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 OR10C1Q96KK4 312 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 DKK4Q9UBT3 224 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 ANAPC10Q9UM13 185 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 A0A0U1RQV5 110 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 MFNGO00587 321 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 XRCC2O43543 280 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 IGHG3P01860 377 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 GLRA1P23415 457 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 LTC4SQ16873 150 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 Q6ZT83 130 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 BHLHA15Q7RTS1 189 aaPredicted RBP11.17□□□□□ -0.62
COL18A1-201ENST00000342220 ZDHHC23Q8IYP9 409 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 POM121L2Q96KW2 1035 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 PRDM14Q9GZV8 571 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 DOK5Q9P104 306 aa11.17□□□□□ -0.62
COL18A1-201ENST00000342220 AHRRA9YTQ3 701 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 H0YL77 283 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 CYCSP99999 105 aaKnown RBP11.16□□□□□ -0.62
COL18A1-201ENST00000342220 GFI1BQ5VTD9 330 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 DHRS11Q6UWP2 260 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 METTL8Q9H825 291 aaKnown RBP11.16□□□□□ -0.62
COL18A1-201ENST00000342220 FAM215AQ9Y5M1 114 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 LRBAP50851 2863 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 C9JQL5 133 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 SPRY3O43610 288 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 RHBDL1O75783 438 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 NPSP0C0P6 89 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 FABP4P15090 132 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 BCL3P20749 454 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 MPV17P39210 176 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 CEBPDP49716 269 aaPredicted RBP11.16□□□□□ -0.62
COL18A1-201ENST00000342220 C1orf185Q5T7R7 199 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 SLC22A25Q6T423 547 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 SEM1Q6ZVN7 128 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 OR56B1Q8NGI3 324 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 PRR7Q8TB68 274 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 SECTM1Q8WVN6 248 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 EHFQ9NZC4 300 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 GSKIPQ9P0R6 139 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 hCG_38984A0A1B0GV85 526 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 TRAPPC2LH3BP13 241 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 SIRPB1O00241 398 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 CECR9P0C854 216 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 RAB32Q13637 225 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 GABRA6Q16445 453 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 CHRFAM7AQ494W8 412 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 AADACL3Q5VUY0 350 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 PRAMEF6Q5VXH4 476 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 RTL6Q6ICC9 239 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 OR5L1Q8NGL2 311 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 TMEM100Q9NV29 134 aa11.16□□□□□ -0.62
COL18A1-201ENST00000342220 SLC33A1O00400 549 aaPredicted RBP11.15□□□□□ -0.62
COL18A1-201ENST00000342220 FPR2P25090 351 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 IGFL2Q6UWQ7 119 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 IL34Q6ZMJ4 242 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 DOLPP1Q86YN1 238 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 LINC00470Q9BZP3 86 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 RGCCQ9H4X1 137 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 RAB18Q9NP72 206 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 RBM7Q9Y580 266 aaKnown RBP11.15□□□□□ -0.62
COL18A1-201ENST00000342220 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 FAM157CP0CG43 387 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms