RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 MRPS24Q96EL2 167 aaKnown RBP10.27□□□□□ -0.76
NECTIN1-203ENST00000341398 RAX2Q96IS3 184 aa10.27□□□□□ -0.76
NECTIN1-203ENST00000341398 S1PR3Q99500 378 aa10.27□□□□□ -0.76
NECTIN1-203ENST00000341398 CHCHD6Q9BRQ6 235 aa10.27□□□□□ -0.76
NECTIN1-203ENST00000341398 FGF20Q9NP95 211 aaPredicted RBP10.27□□□□□ -0.76
NECTIN1-203ENST00000341398 CHCHD3Q9NX63 227 aaKnown RBP10.27□□□□□ -0.76
NECTIN1-203ENST00000341398 TRAPPC2LQ9UL33 140 aa10.27□□□□□ -0.76
NECTIN1-203ENST00000341398 LINC01548A6NM66 108 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 C15orf65H3BRN8 121 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 MT-ND4P03905 459 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 RPLP1P05386 114 aaKnown RBP10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 LIMS3P0CW19 117 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 LIMS4P0CW20 117 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 OR5H8P0DN80 308 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 MYL12AP19105 171 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 SOX6P35712 828 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 C6orf183Q5T699 404 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 STEAP3Q658P3 488 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 TRAT1Q6PIZ9 186 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 ZNF497Q6ZNH5 498 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 Q8N6K4 173 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 DUX3Q96PT4 197 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 ZNF184Q99676 751 aaPredicted RBP10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 BABAM2Q9NXR7 383 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 GNG12Q9UBI6 72 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 IGHV3-43A0A0B4J1X8 118 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 OGG1O15527 345 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 IGHV3-43DP0DP04 118 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 VSIG8P0DPA2 414 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 SYT6Q5T7P8 510 aaPredicted RBP10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 TMEM65Q6PI78 240 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 SLC25A48Q6ZT89 311 aaKnown RBP10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 RGP1Q92546 391 aaPredicted RBP10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 ST6GALNAC6Q969X2 333 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 SMIM19Q96E16 107 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 ETAA1Q9NY74 926 aa10.26□□□□□ -0.77
NECTIN1-203ENST00000341398 DNAH9Q9NYC9 4486 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 CA11O75493 328 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 GPX5O75715 221 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 ETV1P50549 477 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 PRR18Q8N4B5 295 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 RNF152Q8N8N0 203 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 TMEM104Q8NE00 496 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 UBALD1Q8TB05 177 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 SLC29A1Q99808 456 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 PLSCR3Q9NRY6 295 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 KCNIP1Q9NZI2 227 aa10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 EXOSC1Q9Y3B2 195 aaKnown RBP10.25□□□□□ -0.77
NECTIN1-203ENST00000341398 SEC14L6B5MCN3 397 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 IGHG4P01861 327 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 GLAP06280 429 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 ECI1P42126 302 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 ZNF137PP52743 207 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 Q499Y3 187 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 YIF1BQ5BJH7 314 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 OR2G6Q5TZ20 316 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 XAF1Q6GPH4 301 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 RAB12Q6IQ22 244 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 CDH26Q8IXH8 852 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 JAGN1Q8N5M9 183 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 OR4K15Q8NH41 348 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 C4orf3Q8WVX3 66 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 GHSRQ92847 366 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 RDH12Q96NR8 316 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 ZNF581Q9P0T4 197 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 ZNF580Q9UK33 172 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 MRPS28Q9Y2Q9 187 aaKnown RBP10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 PEX16Q9Y5Y5 336 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 U3KQK5 164 aa10.24□□□□□ -0.77
NECTIN1-203ENST00000341398 SORL1Q92673 2214 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 FAM90A10PA6NDY2 464 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 FAM90A7PA6NKC0 464 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 FAM90A23PA8MXZ1 464 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 C12orf77C9JDV5 145 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 LANCL1O43813 399 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 HBZP02008 142 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 IGF1P05019 195 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 IGFBP3P17936 291 aaPredicted RBP10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 FUT3P21217 361 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 INSL3P51460 131 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 F2RL1P55085 397 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 DEFB136Q30KP8 78 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 CT45A1Q5HYN5 189 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 AWAT2Q6E213 333 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 GLIPR1L1Q6UWM5 242 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 PQLC1Q8N2U9 271 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 FAM71E2Q8N5Q1 922 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 CT45A3Q8NHU0 189 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 APH1BQ8WW43 257 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 TMEM80Q96HE8 168 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 KCTD7Q96MP8 289 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 S100A14Q9HCY8 104 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 OR2S2Q9NQN1 319 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 SMPD3Q9NY59 655 aaPredicted RBP10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 ZNF107Q9UII5 783 aaPredicted RBP10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 DIMT1Q9UNQ2 313 aaKnown RBP10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 ERGIC3Q9Y282 383 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 LRRC42Q9Y546 428 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 TENM3Q9P273 2699 aa10.23□□□□□ -0.77
NECTIN1-203ENST00000341398 TRBV5-5A0A0J9YX44 114 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms