RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 K7EPK0 472 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 SDCBPO00560 298 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-201ENST00000340611 SYT7O43581 403 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 H2BFMP0C1H6 154 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 FCGR2CP31995 323 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 CLEC12BQ2HXU8 276 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 ZNF880Q6PDB4 577 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 FAM71E2Q8N5Q1 922 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 COMMD1Q8N668 190 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 OR2AJ1Q8NGZ0 328 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 BANF2Q9H503 90 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 GPR173Q9NS66 373 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 A0A1W2PP11 408 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 ZNF705FA8MVS1 300 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-201ENST00000340611 SRSF10O75494 262 aaKnown RBP12.96□□□□□ -0.33
BRAT1-201ENST00000340611 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-201ENST00000340611 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-201ENST00000340611 FUT3P21217 361 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 BRS3P32247 399 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 WNT5AP41221 380 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 PTTG1IPP53801 180 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 SUPT4H1P63272 117 aaKnown RBP12.96□□□□□ -0.33
BRAT1-201ENST00000340611 KCNMB1Q16558 191 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 SLC35E3Q7Z769 313 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-201ENST00000340611 TMEM183AQ8IXX5 376 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 AQP10Q96PS8 301 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 SH3BGRL3Q9H299 93 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 GAL3ST2Q9H3Q3 398 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 RNF24Q9Y225 148 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 RFNGQ9Y644 331 aa12.96□□□□□ -0.33
BRAT1-201ENST00000340611 MYO7BQ6PIF6 2116 aa12.96□□□□□ -0.34
BRAT1-201ENST00000340611 SOCS1O15524 211 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 SFT2D2O95562 160 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 MPIG6BO95866 241 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 CST4P01036 141 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 IGHG3P01860 377 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 GLRA1P23415 457 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 TAS2R31P59538 309 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 GPR35Q9HC97 309 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 GPR132Q9UNW8 380 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 A0A1W2PPQ1 181 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM210A6NLX4 147 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 E9PLN8 166 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 CDC14BO60729 498 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 SCGB1D2O95969 90 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 MSR1P21757 451 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 TUBG1P23258 451 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 GUCA1AP43080 201 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-201ENST00000340611 ELLP55199 621 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM33P57088 247 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 CCL20P78556 96 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 PCK2Q16822 640 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM268Q5VZI3 342 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 P4HA3Q7Z4N8 544 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 NKAIN3Q8N8D7 197 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 PTX4Q96A99 478 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 A0A0A6YYD4 124 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 XKRY2A2RUG3 117 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 F5H5K5 113 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 EPHA1P21709 976 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 RPL12P30050 165 aaKnown RBP12.95□□□□□ -0.34
BRAT1-201ENST00000340611 QRFPP83859 136 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 FOXF2Q12947 444 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 P2RY6Q15077 328 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 RAB35Q15286 201 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 C10orf128Q5T292 105 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF429Q86V71 674 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 CNEP1R1Q8N9A8 125 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 RNF133Q8WVZ7 376 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 PLEKHA2Q9HB19 425 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 RAB18Q9NP72 206 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 PNRC2Q9NPJ4 139 aaKnown RBP12.95□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF319Q9P2F9 582 aa12.95□□□□□ -0.34
BRAT1-201ENST00000340611 LOC102724200A0A096LPH7 203 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-201ENST00000340611 A0A1W2PR80 420 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 C20orf202A1L168 122 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 CD33P20138 364 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 PLAC9Q5JTB6 97 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF100Q8IYN0 542 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 Q8NA96 180 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 FOXB1Q99853 325 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 SH3BGRL2Q9UJC5 107 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF503-AS2A6NEH8 195 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 ITGB1BP1O14713 200 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 RAD51DO75771 328 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 KNG1P01042 644 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 Q6ZVH6 145 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 SLC22A24Q8N4F4 322 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 C9orf106Q8NAJ2 232 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 ERGIC1Q969X5 290 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 VPS25Q9BRG1 176 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 ST6GALNAC5Q9BVH7 336 aa12.94□□□□□ -0.34
BRAT1-201ENST00000340611 LSM5Q9Y4Y9 91 aaKnown RBP12.94□□□□□ -0.34
BRAT1-201ENST00000340611 IGKV3D-15A0A087WSY6 115 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms