RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 ZNF529Q6P280 563 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 PLSCR3Q9NRY6 295 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 GNG12Q9UBI6 72 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 SCOCQ9UIL1 159 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF580Q9UK33 172 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 ERGIC3Q9Y282 383 aa11.13□□□□□ -0.63
COMMD4-202ENST00000338995 RPL36Q9Y3U8 105 aaKnown RBP11.13□□□□□ -0.63
COMMD4-202ENST00000338995 C15orf65H3BRN8 121 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 AIPO00170 330 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 GEMIN2O14893 280 aaKnown RBP11.12□□□□□ -0.63
COMMD4-202ENST00000338995 IGF1P05019 195 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 ALDH3A2P51648 485 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 CCDC58Q4VC31 144 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 C6orf183Q5T699 404 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 RPL22L1Q6P5R6 122 aaKnown RBP11.12□□□□□ -0.63
COMMD4-202ENST00000338995 TRAT1Q6PIZ9 186 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 C10orf67Q8IYJ2 551 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 OR51A2Q8NGJ7 313 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 OR1N2Q8NGR9 330 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 KCTD7Q96MP8 289 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF107Q9UII5 783 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-202ENST00000338995 VSIG4Q9Y279 399 aa11.12□□□□□ -0.63
COMMD4-202ENST00000338995 E9PI62 339 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 EI24O14681 340 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 SERPINA2P20848 420 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 PSMB8P28062 276 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 BDKRB2P30411 391 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 F2RL1P55085 397 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 SLC22A6Q4U2R8 563 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 DDI2Q5TDH0 399 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 TMPRSS11AQ6ZMR5 421 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF497Q6ZNH5 498 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
COMMD4-202ENST00000338995 TMEM104Q8NE00 496 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 TMEM106AQ96A25 262 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 AMBNQ9NP70 447 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 CKLFQ9UBR5 152 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 DNAH9Q9NYC9 4486 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 SORL1Q92673 2214 aa11.11□□□□□ -0.63
COMMD4-202ENST00000338995 IGHV3-43A0A0B4J1X8 118 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 LANCL1O43813 399 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 IGHV3-43DP0DP04 118 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 FHL3Q13643 280 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 NKAPLQ5M9Q1 402 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 SYT6Q5T7P8 510 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-202ENST00000338995 FAM71E2Q8N5Q1 922 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 RHOXF1Q8NHV9 184 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 MRPS24Q96EL2 167 aaKnown RBP11.1□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF251Q9BRH9 671 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 GHITMQ9H3K2 345 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 KCNIP1Q9NZI2 227 aa11.1□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF736B4DX44 427 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-202ENST00000338995 CA11O75493 328 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 GTF2A1P52655 376 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-202ENST00000338995 ZNF137PP52743 207 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 RUNX1Q01196 453 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 CFHR3Q02985 330 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 MMDQ15546 238 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 CT45A1Q5HYN5 189 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 ZFP1Q6P2D0 407 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 OR52I1Q8NGK6 324 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 CT45A3Q8NHU0 189 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 MUC7Q8TAX7 377 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 UBALD1Q8TB05 177 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 PYDC1Q8WXC3 89 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 HSPB9Q9BQS6 159 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 MRPS18AQ9NVS2 196 aaKnown RBP11.09□□□□□ -0.63
COMMD4-202ENST00000338995 ETAA1Q9NY74 926 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 AASSQ9UDR5 926 aa11.09□□□□□ -0.63
COMMD4-202ENST00000338995 RYR3Q15413 4870 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 IRGMA1A4Y4 181 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 C12orf77C9JDV5 145 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 GLAP06280 429 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 GABRB1P18505 474 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 MED21Q13503 144 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 RIPK1Q13546 671 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 PRR18Q8N4B5 295 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 CBR4Q8N4T8 237 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 ZNF491Q8N8L2 437 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 ZNF184Q99676 751 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-202ENST00000338995 PALMDQ9NP74 551 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 OR2S2Q9NQN1 319 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 KIAA1456Q9P272 454 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 LRRC42Q9Y546 428 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 WSB1Q9Y6I7 421 aa11.08□□□□□ -0.64
COMMD4-202ENST00000338995 LOC100130705A0A1B0GUX0 176 aa11.07□□□□□ -0.64
COMMD4-202ENST00000338995 I3L521 148 aa11.07□□□□□ -0.64
COMMD4-202ENST00000338995 OVOL1O14753 267 aa11.07□□□□□ -0.64
COMMD4-202ENST00000338995 RGS11O94810 467 aa11.07□□□□□ -0.64
COMMD4-202ENST00000338995 HBZP02008 142 aa11.07□□□□□ -0.64
COMMD4-202ENST00000338995 SLC2A2P11168 524 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-202ENST00000338995 MYF6P23409 242 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms